Recognition of protein Function Using the Local Similarity. - Kirill Alexandrov; Boris Sobolev; Dmitry Filimonov; Vladimir Poroikov (J. Bioinform. Comput. Biol., 2008)

Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates. - Boris Sobolev; Dmitry Filimonov; Alexey Lagunin; Alexey V. Zakharov; Olga Koborova; Alexander E. Kel; Vladimir Poroikov (BMC Bioinform., 2010)

The method predicting interaction between protein targets and small-molecular ligands with the wide applicability domain. - Dmitry A. Karasev; Boris Sobolev; Alexey Lagunin; Dmitry Filimonov; Vladimir Poroikov (Comput. Biol. Chem., 2022)

Understanding the Effectiveness of Large Language Models in Code Translation. - Rangeet Pan; Ali Reza Ibrahimzada; Rahul Krishna; Divya Sankar; Lambert Pouguem Wassi; Michele Merler; Boris Sobolev; Raju Pavuluri; Saurabh Sinha; Reyhaneh Jabbarvand (CoRR, 2023)

Lost in Translation: A Study of Bugs Introduced by Large Language Models while Translating Code. - Rangeet Pan; Ali Reza Ibrahimzada; Rahul Krishna; Divya Sankar; Lambert Pouguem Wassi; Michele Merler; Boris Sobolev; Raju Pavuluri; Saurabh Sinha; Reyhaneh Jabbarvand (ICSE, 2024)

Prediction of viral protease inhibitors using proteochemometrics approach. - Dmitry A. Karasev; Boris Sobolev; Dmitrii Filimonov; Alexey Lagunin (Comput. Biol. Chem., 2024)