Parallel feature selection for distributed-memory clusters. - Jorge González-Domínguez; Verónica Bolón-Canedo; Borja Freire; Juan Touriño (Inf. Sci., 2019)

Compact and efficient representation of general graph databases. - Sandra Álvarez-García; Borja Freire; Susana Ladra; Óscar Pedreira Fernández (Knowl. Inf. Syst., 2019)

Inference of viral quasispecies with a paired de Bruijn graph. - Borja Freire; Susana Ladra; José R. Paramá; Leena Salmela (Bioinform., 2021)

Memory-Efficient Assembly Using Flye. - Borja Freire; Susana Ladra; José R. Paramá (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

ViQUF: De Novo Viral Quasispecies Reconstruction Using Unitig-Based Flow Networks. - Borja Freire; Susana Ladra; José R. Paramá; Leena Salmela (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)