The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing. - Nathan L. Clement; Quinn Snell; Mark J. Clement; Peter C. Hollenhorst; Jahnvi Purwar; Barbara J. Graves; Bradley R. Cairns; W. Evan Johnson (Bioinform., 2010)

Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data. - Changjin Hong; Nathan L. Clement; Spencer Clement; Saher Sue Hammoud; Douglas T. Carrell; Bradley R. Cairns; Quinn Snell; Mark J. Clement; William Evan Johnson (BMC Bioinform., 2013)