ForestQC: Quality control on genetic variants from next-generation sequencing data using random forest. - Jiajin Li; Brandon Jew; Lingyu Zhan; Sungoo Hwang; Giovanni Coppola; Nelson B. Freimer; Jae Hoon Sul (PLoS Comput. Biol., 2019)

An Efficient Linear Mixed Model Framework for Meta-Analytic Association Studies Across Multiple Contexts. - Brandon Jew; Jiajin Li; Sriram Sankararaman; Jae Hoon Sul (WABI, 2021)

xGAP: a python based efficient, modular, extensible and fault tolerant genomic analysis pipeline for variant discovery. - Aditya Gorla; Brandon Jew; Luke Zhang; Jae Hoon Sul (Bioinform., 2021)

The Effect of Model Directionality on Cell-Type-Specific Differential DNA Methylation Analysis. - Elior Rahmani; Brandon Jew; Eran Halperin (Frontiers Bioinform., 2021)