Mixing metafor. - Breanndán Ó Nualláin (LPAR, 1993)

Theorem Proving and Programming with Dynamic First Order Logic. - Jan van Eijck; Juan Heguiabehere; Breanndán Ó Nualláin (WFLP, 2000)

A Niche Width Model of Optimal Specialization. - Jeroen Bruggeman; Breanndán Ó Nualláin (Comput. Math. Organ. Theory, 2000)

Ensemble-based prediction of SAT search behaviour. - Breanndán Ó Nualláin; Maarten de Rijke; Johan van Benthem (Electron. Notes Discret. Math., 2001)

Tableau Reasoning and Programming with Dynamic First Order Logic. - Jan van Eijck; Juan Heguiabehere; Breanndán Ó Nualláin (Log. J. IGPL, 2001)

Online Suffix Trees with Counts. - Breanndán Ó Nualláin; Steven de Rooij (Data Compression Conference, 2004)

Application of parallel computing to stochastic parameter estimation in environmental models. - Jasper A. Vrugt; Breanndán Ó Nualláin; Bruce A. Robinson; Willem Bouten; Stefan C. Dekker; Peter M. A. Sloot (Comput. Geosci., 2006)

Parameter Sweeps for Functional MRI Research in the "Virtual Laboratory for e-Science" Project. - Sílvia Delgado Olabarriaga; Aart J. Nederveen; Breanndán Ó Nualláin (CCGRID, 2007)

Multi-Science Decision Support for HIV Drug Resistance Treatment. - Peter M. A. Sloot; Peter V. Coveney; Marian Bubak; Anne-Mieke Vandamme; Breanndán Ó Nualláin; David A. van de Vijver; Charles A. Boucher (HealthGrid, 2008)

A Multiphysics and Multiscale Software Environment for Modeling Astrophysical Systems. - Simon Portegies Zwart; Steve McMillan; Breanndán Ó Nualláin; Douglas Heggie; James Lombardi; Piet Hut; Sambaran Banerjee; Houria Belkus; Tassos Fragos; John Fregeau; Michiko Fuji; Evghenii Gaburov; et al. (ICCS (2), 2008)

A Collaborative Environment Allowing Clinical Investigations on Integrated Biomedical Databases. - Matthias Assel; David A. van de Vijver; Pieter Libin; Kristof Theys; Daniel Harezlak; Breanndán Ó Nualláin; Piotr Nowakowski; Marian Bubak; Anne-Mieke Vandamme; Stijn Imbrechts; Raphael Sangeda; Tao Jiang; et al. (HealthGrid, 2009)

A logical framework for detecting anomalies in drug resistance algorithms. - Luciano Caroprese; Peter M. A. Sloot; Breanndán Ó Nualláin; Ester Zumpano (IDEAS, 2009)

Extracting causal relations on HIV drug resistance from literature. - Quoc-Chinh Bui; Breanndán Ó Nualláin; Charles A. Boucher; Peter M. A. Sloot (BMC Bioinform., 2010)

Executable Pseudocode for Graph Algorithms. - Breanndán Ó Nualláin (ELS, 2015)

Discovering Motifs in Real-World Social Networks. - Lotte B. Romijn; Breanndán Ó Nualláin; Leen Torenvliet (SOFSEM, 2015)