EcoliWiki: a wiki-based community resource for Escherichia coli. - Brenley K. McIntosh; Daniel P. Renfro; Gwendowlyn S. Knapp; Chanchala R. Lairikyengbam; Nathan M. Liles; Lili Niu; Amanda M. Supak; Anand Venkatraman; Adrienne E. Zweifel; Deborah A. Siegele; James C. Hu (Nucleic Acids Res., 2012)

GONUTS: the Gene Ontology Normal Usage Tracking System. - Daniel P. Renfro; Brenley K. McIntosh; Anand Venkatraman; Deborah A. Siegele; James C. Hu (Nucleic Acids Res., 2012)

PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools. - James C. Hu; Gavin Sherlock; Deborah A. Siegele; Suzanne A. Aleksander; Catherine A. Ball; Janos Demeter; Sushanth Gouni; Timothy A. Holland; Peter D. Karp; John E. Lewis; Nathan M. Liles; Brenley K. McIntosh; et al. (Nucleic Acids Res., 2014)

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO). - Jolene Ramsey; Brenley K. McIntosh; Daniel P. Renfro; Suzanne A. Aleksander; Sandra A. LaBonte; Curtis Ross; Adrienne E. Zweifel; Nathan Liles; Shabnam Farrar; Jason J. Gill; Ivan Erill; Sarah Ades; et al. (PLoS Comput. Biol., 2021)