Predicting subcellular localization of proteins using machine-learned classifiers. - Zhiyong Lu; Duane Szafron; Russell Greiner; Paul Lu; David S. Wishart; Brett Poulin; John Anvik; Cam Macdonell; Roman Eisner (Bioinform., 2004)

Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations. - Duane Szafron; Paul Lu; Russell Greiner; David S. Wishart; Brett Poulin; Roman Eisner; Zhiyong Lu; John Anvik; Cam Macdonell; Alona Fyshe; David Meeuwis (Nucleic Acids Res., 2004)

The Proteome Analyst Suite of Automated Function Prediction Tools. - Brett Poulin; Duane Szafron; Paul Lu; Russell Greiner; David S. Wishart; Roman Eisner; Alona Fyshe; Brandon Pearcy; Luca Pireddu (AAAI, 2005)

Improving Protein Function Prediction Using the Hierarchical Structure of the Gene Ontology. - Roman Eisner; Brett Poulin; Duane Szafron; Paul Lu; Russell Greiner (CIBCB, 2005)

Pathway Analyst–Automated Metabolic Pathway Prediction. - Luca Pireddu; Brett Poulin; Duane Szafron; Paul Lu; David S. Wishart (CIBCB, 2005)

PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization. - Paul Lu; Duane Szafron; Russell Greiner; David S. Wishart; Alona Fyshe; Brandon Pearcy; Brett Poulin; Roman Eisner; Danny Ngo; Nicholas Lamb (Nucleic Acids Res., 2005)

Visual Explanation of Evidence with Additive Classifiers. - Brett Poulin; Roman Eisner; Duane Szafron; Paul Lu; Russell Greiner; David S. Wishart; Alona Fyshe; Brandon Pearcy; Cam Macdonell; John Anvik (AAAI, 2006)