A Semi-Quantitative, Synteny-Based Method to Improve Functional Predictions for Hypothetical and Poorly Annotated Bacterial and Archaeal Genes. - Alexis P. Yelton; Brian C. Thomas; Sheri L. Simmons; Paul Wilmes; Adam T. Zemla; Michael P. Thelen; Nicholas Justice; Jillian F. Banfield (PLoS Comput. Biol., 2011)

Persisting Viral Sequences Shape Microbial CRISPR-based Immunity. - Ariel D. Weinberger; Christine L. Sun; Mateusz M. Plucinski; Vincent J. Denef; Brian C. Thomas; Philippe Horvath; Rodolphe Barrangou; Michael S. Gilmore; Wayne M. Getz; Jillian F. Banfield (PLoS Comput. Biol., 2012)

New CRISPR-Cas systems from uncultivated microbes. - David Burstein; Lucas B. Harrington; Steven C. Strutt; Alexander J. Probst; Karthik Anantharaman; Brian C. Thomas; Jennifer A. Doudna; Jillian F. Banfield (Nat., 2017)