Allosteric mechanism of the circadian protein Vivid resolved through Markov state model and machine learning analysis. - Hongyu Zhou; Zheng Dong; Gennady Verkhivker; Brian D. Zoltowski; Peng Tao 001 (PLoS Comput. Biol., 2019)

Dimeric allostery mechanism of the plant circadian clock photoreceptor ZEITLUPE. - Francesco Trozzi; Feng Wang 068; Gennady Verkhivker; Brian D. Zoltowski; Peng Tao 001 (PLoS Comput. Biol., 2021)

Allosteric regulation in STAT3 interdomains is mediated by a rigid core: SH2 domain regulation by CCD in D170A variant. - Tingting Zhao; Nischal Karki; Brian D. Zoltowski; Devin A. Matthews (PLoS Comput. Biol., 2022)

β-sheets mediate the conformational change and allosteric signal transmission between the AsLOV2 termini. - Sian Xiao; Mayar Tarek Ibrahim; Gennady M. Verkhivker; Brian D. Zoltowski; Peng Tao 001 (J. Comput. Chem., 2024)