Quality Assessment of Affymetrix GeneChip Data using the EM Algorithm and a Naive Bayes Classifier. - Brian E. Howard; Beate Sick; Imara Perera; Yang Ju Im; Heike Winter-Sederoff; Steffen Heber (BIBE, 2007)

Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression. - Brian E. Howard; Beate Sick; Steffen Heber (ISBRA, 2009)

Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing. - Jihye Kim 005; Sihui Zhao; Brian E. Howard; Steffen Heber (ISBRA, 2009)

Unsupervised assessment of microarray data quality using a Gaussian mixture model. - Brian E. Howard; Beate Sick; Steffen Heber (BMC Bioinform., 2009)

Towards reliable isoform quantification using RNA-SEQ data. - Brian E. Howard; Steffen Heber (BMC Bioinform., 2010)

Improved RNA-Seq Partitions in Linear Models for Isoform Quantification. - Brian E. Howard; Paola Veronese; Steffen Heber (BIBM, 2011)

Workshop: Using a transcript catalog and paired-end RNA-Seq data to identify differential alternative splicing. - Brian E. Howard; Xiaoping Tan; Paola Veronese; Steffen Heber (ICCABS, 2011)

Bayesian Analysis of Dynamic Linear Topic Models. - Chris Glynn; Surya T. Tokdar; David L. Banks; Brian E. Howard (CoRR, 2015)

A Pragmatic Approach to Information Extraction for Systematic Review. - Adyasha Maharana; Arpit Tandon; Eric Wimberley; Mihir Shah; Ruchir R. Shah; Brian E. Howard (TAC, 2018)

Unsupervised Data Augmentation with Naive Augmentation and without Unlabeled Data. - David Lowell; Brian E. Howard; Zachary C. Lipton; Byron C. Wallace (EMNLP (1), 2021)

A Tissue-Specific and Toxicology-Focused Knowledge Graph. - Ignacio J. Tripodi; Lena Schmidt; Brian E. Howard; Deepak Mav; Ruchir R. Shah (Inf., 2023)