Markov State Models of gene regulatory networks. - Brian K. Chu; Margaret J. Tse; Royce R. Sato; Elizabeth L. Read (BMC Syst. Biol., 2017)

Rare-event sampling of epigenetic landscapes and phenotype transitions. - Margaret J. Tse; Brian K. Chu; Cameron P. Gallivan; Elizabeth L. Read (PLoS Comput. Biol., 2018)

Improved Methods of Simulation and Analysis For Stochastic Processes in Cell Biology - Brian K. Chu (2019)