The inverse nearest neighbor problem with astrophysical applications. - Richard J. Anderson 001; Brian Tjaden (SODA, 2001)

Identifying operons and untranslated regions of transcripts using Escherichia coli RNA expression analysis. - Brian Tjaden; David R. Haynor; Sergey Stolyar; Carsten Rosenow; Eugene Kolker (ISMB, 2002)

Coding in tongues: a bilingual programming perspective to data structures. - Brian Tjaden; Hannah Tang (J. Comput. Sci. Coll., 2003)

Training students to administer and defend computer networks and systems. - Brian Tjaden; Brett C. Tjaden (ITiCSE, 2006)

An approach for clustering gene expression data with error information. - Brian Tjaden (BMC Bioinform., 2006)

A multidisciplinary course in computational biology. - Brian Tjaden (J. Comput. Sci. Coll., 2007)

TargetRNA: a tool for predicting targets of small RNA action in bacteria. - Brian Tjaden (Nucleic Acids Res., 2008)

TargetRNA2: identifying targets of small regulatory RNAs in bacteria. - Mary Beth Kery; Monica Feldman; Jonathan Livny; Brian Tjaden (Nucleic Acids Res., 2014)