Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species. - Manolis Kamvysselis; Nick Patterson; Bruce Birren; Bonnie Berger; Eric S. Lander (RECOMB, 2003)

Methods in Comparative Genomics: Genome Correspondence, Gene Identification and Regulatory Motif Discovery. - Manolis Kellis; Nick Patterson; Bruce Birren; Bonnie Berger; Eric S. Lander (J. Comput. Biol., 2004)