Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets. - Saumyadipta Pyne; Bruce Futcher; Steven Skiena (Bioinform., 2006)

Optimal codon pair bias design (extended abstract). - Nolan Donoghue; Justin Gardin; Bruce Futcher; Steven Skiena (BIBM, 2017)

Pre-Phaser: Precise Cell-Cycle Phase Detector for scRNA-seq. - Alisa Yurovsky; Bruce Futcher; Steven Skiena (BCB, 2019)

Statistical methodology for ribosomal frameshift detection. - Alisa Yurovsky; Justin Gardin; Bruce Futcher; Steven Skiena (BCB, 2022)