Simulating a Coalescent Process with Recombination and Ascertainment. - Ying Wang; Bruce Rannala (Computational Methods for SNPs and Haplotype Inference, 2002)

DMLE+: Bayesian linkage disequilibrium gene mapping. - Jeff P. Reeve; Bruce Rannala (Bioinform., 2002)

Joint Bayesian Estimation of Mutation Location and Age Using Linkage Disequilibrium. - Bruce Rannala; Jeff P. Reeve (Pacific Symposium on Biocomputing, 2003)

PrioriTree: a utility for improving phylodynamic analyses in BEAST. - Jiansi Gao; Michael R. May; Bruce Rannala; Brian R. Moore (Bioinform., 2023)