Computational modeling of the immune response to tumor antigens: implications for vaccination. - Filippo Castiglione; Federico Toschi; Massimo Bernaschi; Sauro Succi; Roberta Benedetti; Brunangelo Falini; Arcangelo Liso (CDC, 2004)

SAVI: a statistical algorithm for variant frequency identification. - Vladimir Trifonov; Laura Pasqualucci; Enrico Tiacci; Brunangelo Falini; Raul Rabadan (BMC Syst. Biol., 2013)

A comprehensive RNA-Seq pipeline includes meta-analysis, interactivity and automatic reporting. - Giulio Spinozzi; Valentina Tini; Laura Mincarelli; Brunangelo Falini; Maria Paola Martelli (PeerJ Prepr., 2018)

ARPIR: automatic RNA-Seq pipelines with interactive report. - Giulio Spinozzi; Valentina Tini; Alessia Adorni; Brunangelo Falini; Maria Paola Martelli (BMC Bioinform., 2020)