Discovering the Phylodynamics of RNA Viruses. - Edward C. Holmes; Bryan T. Grenfell (PLoS Comput. Biol., 2009)

Spatial Transmission of 2009 Pandemic Influenza in the US. - Julia R. Gog; Sébastien Ballesteros; Cécile Viboud; Lone Simonsen; Ottar N. Bjørnstad; Jeffrey Shaman; Dennis L. Chao; Farid Khan; Bryan T. Grenfell (PLoS Comput. Biol., 2014)

Persistent Chaos of Measles Epidemics in the Prevaccination United States Caused by a Small Change in Seasonal Transmission Patterns. - Benjamin D. Dalziel; Ottar N. Bjørnstad; Willem G. van Panhuis; Donald S. Burke; C. Jessica E. Metcalf; Bryan T. Grenfell (PLoS Comput. Biol., 2016)

Universal or Specific? A Modeling-Based Comparison of Broad-Spectrum Influenza Vaccines against Conventional, Strain-Matched Vaccines. - Rahul Subramanian; Andrea L. Graham; Bryan T. Grenfell; Nimalan Arinaminpathy (PLoS Comput. Biol., 2016)

Human mobility and the spatial transmission of influenza in the United States. - Vivek Charu; Scott Zeger; Julia R. Gog; Ottar N. Bjørnstad; Stephen Kissler; Lone Simonsen; Bryan T. Grenfell; Cécile Viboud (PLoS Comput. Biol., 2017)

A mechanistic spatio-temporal framework for modelling individual-to-individual transmission - With an application to the 2014-2015 West Africa Ebola outbreak. - Max S. Y. Lau; Gavin J. Gibson; Hola Adrakey; Amanda McClelland; Steven Riley; Jon Zelner; George Streftaris; Sebastian Funk; C. Jessica E. Metcalf; Benjamin D. Dalziel; Bryan T. Grenfell (PLoS Comput. Biol., 2017)

Deploying digital health data to optimize influenza surveillance at national and local scales. - Elizabeth C. Lee; Ali Arab 002; Sandra M. Goldlust; Cécile Viboud; Bryan T. Grenfell; Shweta Bansal (PLoS Comput. Biol., 2018)

Long-term dynamics of measles in London: Titrating the impact of wars, the 1918 pandemic, and vaccination. - Alexander D. Becker; Amy Wesolowski; Ottar N. Bjørnstad; Bryan T. Grenfell (PLoS Comput. Biol., 2019)

Model diagnostics and refinement for phylodynamic models. - Max S. Y. Lau; Bryan T. Grenfell; Colin J. Worby; Gavin J. Gibson (PLoS Comput. Biol., 2019)

Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans. - Chadi M. Saad-Roy; Nimalan Arinaminpathy; Ned S. Wingreen; Simon A. Levin; Joshua M. Akey; Bryan T. Grenfell (PLoS Comput. Biol., 2020)

Challenges in cybersecurity: Lessons from biological defense systems. - Edward C. Schrom II; Ann Kinzig; Stephanie Forrest; Andrea L. Graham; Simon A. Levin; Carl T. Bergstrom; Carlos Castillo-Chavez; James P. Collins 002; Rob J. De Boer; Adam Doupé; Roya Ensafi; Stuart I. Feldman; et al. (CoRR, 2021)

Trip duration drives shift in travel network structure with implications for the predictability of spatial disease spread. - John R. Giles; Derek A. T. Cummings; Bryan T. Grenfell; Andrew J. Tatem; Elisabeth Zu Erbach-Schoenberg; C. Jessica E. Metcalf; Amy Wesolowski (PLoS Comput. Biol., 2021)

Comparing and linking machine learning and semi-mechanistic models for the predictability of endemic measles dynamics. - Max S. Y. Lau; Alexander D. Becker; Wyatt Madden; Lance A. Waller; C. Jessica E. Metcalf; Bryan T. Grenfell (PLoS Comput. Biol., 2022)

Using real-time data to guide decision-making during an influenza pandemic: A modelling analysis. - David J. Haw; Matthew Biggerstaff; Pragati Prasad; Joseph Walker; Bryan T. Grenfell; Nimalan Arinaminpathy (PLoS Comput. Biol., 2023)

Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2. - Bjarke Frost Nielsen; Chadi M. Saad-Roy; Yimei Li; Kim Sneppen; Lone Simonsen; Cécile Viboud; Simon A. Levin; Bryan T. Grenfell (PLoS Comput. Biol., 2023)

Impact of waning immunity against SARS-CoV-2 severity exacerbated by vaccine hesitancy. - Chadi M. Saad-Roy; Sinead E. Morris; Mike Boots; Rachel E. Baker; Bryan L. Lewis; Jeremy Farrar; Madhav V. Marathe; Andrea L. Graham; Simon A. Levin; Caroline E. Wagner; C. Jessica E. Metcalf; Bryan T. Grenfell (PLoS Comput. Biol., 2024)