matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2. - Cheng Ye; Bryan Thornlow; Angie S. Hinrichs; Alexander Kramer; Cade Mirchandani; Devika Torvi; Robert Lanfear; Russell Corbett-Detig; Yatish Turakhia (Bioinform., 2022)

DecentTree: scalable Neighbour-Joining for the genomic era. - Weiwen Wang; James Barbetti; Thomas Wong; Bryan Thornlow; Russell Corbett-Detig; Yatish Turakhia; Robert Lanfear; Bui Quang Minh (Bioinform., 2023)