ArrayPipe: a flexible processing pipeline for microarray data. - Karsten Hokamp; Fiona M. Roche; Michael Acab; Marc-Etienne Rousseau; Byron Kuo; David L. Goode; Dana Aeschliman; Jenny Bryan; Lorne A. Babiuk; Robert E. W. Hancock; Fiona S. L. Brinkman (Nucleic Acids Res., 2004)

CGMIM: Automated text-mining of Online Mendelian Inheritance in Man (OMIM) to identify genetically-associated cancers and candidate genes. - Chris D. Bajdik; Byron Kuo; Shawn Rusaw; Steven J. M. Jones; Angela Brooks-Wilson (BMC Bioinform., 2005)

BMDExpress 2: enhanced transcriptomic dose-response analysis workflow. - Jason R. Phillips; Daniel L. Svoboda; Arpit Tandon; Shyam Patel; Alex Sedykh; Deepak Mav; Byron Kuo; Carole L. Yauk; Longlong Yang; Russell S. Thomas; Jeff S. Gift; J. Allen Davis; et al. (Bioinform., 2019)