iHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP website. - Benjamin M. Good; Edward A. Kawas; Byron Yu-Lin Kuo; Mark D. Wilkinson (BMC Bioinform., 2006)

SAGE2Splice: Unmapped SAGE Tags Reveal Novel Splice Junctions. - Byron Yu-Lin Kuo; Ying Chen; Slavita Bohacec; Öjvind Johansson; Wyeth W. Wasserman; Elizabeth M. Simpson (PLoS Comput. Biol., 2006)

Tag clouds for summarizing web search results. - Byron Yu-Lin Kuo; Thomas Hentrich; Benjamin M. Good; Mark D. Wilkinson (WWW, 2007)