Simulating clinical trials. A methodology for validating pharmacodynamic predictions. - C. Anthony Hunt (CATA, 1999)

Therapeutic engineering: Models of individual variability in drug systems. - Amina Qutub; Alex Lancaster; C. Anthony Hunt (CATA, 2001)

A novel method for visualizing similarity in gene expression and other large datasets. - Sandy Shaw; C. Anthony Hunt (CATA, 2001)

Biomimetic in Silico Devices. - C. Anthony Hunt; Glen E. P. Ropella; Michael S. Roberts; Li Yan (CMSB, 2004)

An In Silico Analogue of In Vitro Systems Used to Study Epithelial Cell Morphogenesis. - Mark R. Grant; C. Anthony Hunt (CMSB, 2006)

In silico analogues of epithelial cell growth and morphogenesis. - Sean H. J. Kim; Mark R. Grant; Sunwoo Park; C. Anthony Hunt (WSC, 2006)

Prediction of in vitro hepatic biliary excretion using stochastic agent-based modeling and fuzzy clustering. - Shahab Sheikh-Bahaei; C. Anthony Hunt (WSC, 2006)

Simulating Properties of In Vitro Epithelial Cell Morphogenesis. - Mark R. Grant; Keith E. Mostov; Thea D. Tlsty; C. Anthony Hunt (PLoS Comput. Biol., 2006)

Cost-based Partitioning for Distributed and Parallel Simulation of Decomposable Multiscale Constructive Models. - Sunwoo Park; C. Anthony Hunt; Bernard P. Zeigler (Simul., 2006)

Affects of Surface Detection on Shape and Growth of Model Tumor Spheroids. - Jesse Engelberg; Glen E. P. Ropella; C. Anthony Hunt (CAINE, 2007)

Systems Modeling of Alveolar Morphogenesis In Vitro. - Sean H. J. Kim; Sunwoo Park; Wei Yu; Keith E. Mostov; Michael A. Matthay; C. Anthony Hunt (CAINE, 2007)

Simulation Processors and Their Collaboration for DEVS Models Integrated with Universal Coupling Specification. - Sunwoo Park; Sean H. J. Kim; C. Anthony Hunt (CAINE, 2007)

Tracking Compounds and Their Interactions within In Silico Liver. - Sunwoo Park; Sean H. J. Kim; Glen E. P. Ropella; C. Anthony Hunt (CAINE, 2007)

Parameter Estimation via Analysis of Fuzzy Clusters (PEAF): An Algorithm to Estimate Parameters of Agent-Based Models. - Shahab Sheikh-Bahaei; C. Anthony Hunt (CAINE, 2007)

Dynamics of in silico leukocyte rolling, activation, and adhesion. - Jonathan Tang; Klaus Ley; C. Anthony Hunt (BMC Syst. Biol., 2007)

In silico white blood cell: mechanisms underlying leukocyte rolling and adhesion during inflammation. - Jonathan Tang; C. Anthony Hunt (SpringSim, 2008)

Predicting hepatic disposition properties of cationic drugs using a physiologically based, agent-oriented In Silico Liver. - Li Yan; Sunwoo Park; Shahab Sheikh-Bahaei; Glen E. P. Ropella; C. Anthony Hunt (SpringSim, 2008)

Essential operating principles for tumor spheroid growth. - Jesse Engelberg; Glen E. P. Ropella; C. Anthony Hunt (BMC Syst. Biol., 2008)

In Silico White Blood Cell: A Synthetic Model of Leukocyte Rolling, Activation, and Adhesion During Inflammation. - Jonathan Tang; C. Anthony Hunt (CAINE, 2009)

Agent-based modeling of alveolar type II cyst formation in vitro. - Sean H. J. Kim; Shahab Sheikh-Bahaei; C. Anthony Hunt (SpringSim, 2009)

Focus on discovering mechanisms: a relativistic, agent-directed, perfused liver. - Tai Ning Lam; Glen E. P. Ropella; C. Anthony Hunt (SpringSim, 2009)

Multi-agent based modeling of liver detoxification. - Shahab Sheikh-Bahaei; Sean H. J. Kim; C. Anthony Hunt (SpringSim, 2009)

A computational approach to resolve cell level contributions to early glandular epithelial cancer progression. - Sean H. J. Kim; Jayanta Debnath; Keith E. Mostov; Sunwoo Park; C. Anthony Hunt (BMC Syst. Biol., 2009)

Evaluating an hepatic enzyme induction mechanism through coarse- and fine-grained measurements of an in silico liver. - Glen E. P. Ropella; Sunwoo Park; C. Anthony Hunt (Complex., 2009)

An Agent-based System Model to Support Cardiac Tissue Engineering: Preliminary Results. - Laura Gaetano; Giacomo Di Benedetto; Umberto Morbiducci; Franco M. Montevecchi; C. Anthony Hunt (SEDE, 2010)

Predicting Human Hepatic Clearance Using Hypernet Neural Networks. - Shahab Sheikh-Bahaei; Kamran A. Ali; Sabina R. Bera; C. Anthony Hunt (SEDE, 2010)

Agent-based simulation of drug disposition in cirrhotic liver. - Sean H. J. Kim; Sunwoo Park; Glen E. P. Ropella; C. Anthony Hunt (SpringSim, 2010)

Simulating plausible mechanisms for changing hepatic xenobiotic clearance patterns. - Shahab Sheikh-Bahaei; C. Anthony Hunt (WSC, 2010)

Cloud computing and validation of expandable in silico livers. - Glen E. P. Ropella; C. Anthony Hunt (BMC Syst. Biol., 2010)

Agent-Directed Tracing of Multi-Scale Drug Disposition Events within Normal and Diseased In Silico Livers. - Sean H. J. Kim; Sunwoo Park; Glen E. P. Ropella; C. Anthony Hunt (Int. J. Agent Technol. Syst., 2010)

Identifying the Rules of Engagement Enabling Leukocyte Rolling, Activation, and Adhesion. - Jonathan Tang; C. Anthony Hunt (PLoS Comput. Biol., 2010)

A robust in silico analogue of MDCK cystogenesis mimics growth in multiple culture conditions. - Jesse Engelberg; Anirban Datta; Keith E. Mostov; C. Anthony Hunt (SpringSim (ADS), 2011)

Composite cell agent model of epithelial culture in vitro. - Sean H. J. Kim; C. Anthony Hunt (SpringSim (ADS), 2011)

MDCK Cystogenesis Driven by Cell Stabilization within Computational Analogues. - Jesse Engelberg; Anirban Datta; Keith E. Mostov; C. Anthony Hunt (PLoS Comput. Biol., 2011)

Zonation of drug-induced, hepatic enzyme induction: falsifying fine grained mechanisms within a validated, multiscale In Silico Liver. - Glen E. P. Ropella; C. Anthony Hunt (SpringSim (ADS), 2012)

Falsifying an Enzyme Induction Mechanism within a Validated, Multiscale Liver Model. - Glen E. P. Ropella; Ryan C. Kennedy; C. Anthony Hunt (Int. J. Agent Technol. Syst., 2012)

Mechanistic agent-based damage and repair models as hypotheses for patterns of necrosis caused by drug induced liver injury. - Andrew K. Smith; Glen E. P. Ropella; Neil Kaplowitz; Murad Ookhtens; C. Anthony Hunt (SummerSim, 2014)

Toward modular biological models: defining analog modules based on referent physiological mechanisms. - Brenden K. Petersen; Glen E. P. Ropella; C. Anthony Hunt (BMC Syst. Biol., 2014)

Implementing a cell-centered, agent-based framework with flexible environment granularities using MASON and VTK. - Ryan C. Kennedy; Glen E. P. Ropella; C. Anthony Hunt (SpringSim (ADS), 2016)

Developing a vision for executing scientifically useful virtual biomedical experiments. - Brenden K. Petersen; C. Anthony Hunt (SpringSim (ADS), 2016)

Measuring analog granularity. - Glen E. P. Ropella; C. Anthony Hunt (SpringSim (ADS), 2016)

Virtual experiments help explain intra- and inter-strain variability of AILI-induced hepatic necrosis in mice. - Andrew K. Smith; Glen E. P. Ropella; C. Anthony Hunt; Neil Kaplowitz; Murad Ookhtens (SpringSim (ADS), 2016)

Competing Mechanistic Hypotheses of Acetaminophen-Induced Hepatotoxicity Challenged by Virtual Experiments. - Andrew K. Smith; Brenden K. Petersen; Glen E. P. Ropella; Ryan C. Kennedy; Neil Kaplowitz; Murad Ookhtens; C. Anthony Hunt (PLoS Comput. Biol., 2016)

Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience. - Lealem Mulugeta; Andrew Drach; Ahmet Erdemir; C. Anthony Hunt; Marc Horner; Joy P. Ku; Jerry G. Myers Jr.; Rajanikanth Vadigepalli; William W. Lytton (Frontiers Neuroinformatics, 2018)

Simulation enabled search for explanatory mechanisms of the fracture healing process. - Ryan C. Kennedy; Meir Marmor; Ralph Marcucio; C. Anthony Hunt (PLoS Comput. Biol., 2018)

Contrasting model mechanisms of alanine aminotransferase (ALT) release from damaged and necrotic hepatocytes as an example of general biomarker mechanisms. - Andrew K. Smith; Glen E. P. Ropella; Mitchell R. McGill; Preethi Krishnan; Lopamudra Dutta; Ryan C. Kennedy; Hartmut Jaeschke; C. Anthony Hunt (PLoS Comput. Biol., 2020)

Bridging Domains in Chronic Lower Back Pain: Large Language Models and Ontology-Driven Strategies for Knowledge Graph Construction. - Paul Anderson; Damon Lin; Jean Davidson; Theresa Migler; Iris Ho; Cooper Koenig; Madeline Bittner; Samuel Kaplan; Mayumi Paraiso; Nasreen Buhn; Emily Stokes; C. Anthony Hunt; et al. (IWBBIO (2), 2024)