Classification of JPEG2000 compressed CT images. - Kathleen Steinhöfel; C. Forbes Dewey Jr.; D. Janssens; Benoît Macq (DSP, 2002)

Efficient XML Query Processing in RDBMS Using GUI-Driven Prefetching in a Single-User Environment. - Sandeep Prakash; Sourav S. Bhowmick; Klarinda G. Widjanarko; C. Forbes Dewey Jr. (DASFAA, 2007)

BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations. - Yang Song; Sourav S. Bhowmick; C. Forbes Dewey Jr. (DASFAA, 2007)

A web based tool for integration of molecular pathway models. - Eva Sciacca; V. A. Shiva Ayyadurai; C. Forbes Dewey Jr. (BIBE, 2008)

The Steady States and Dynamics of Urokinase-mediated Plasmin Activation. - Lakshmi Venkatraman; Hanry Yu; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Lisa Tucker-Kellogg (Pacific Symposium on Biocomputing, 2010)

Pani: a novel algorithm for fast discovery of putative target nodes in signaling networks. - Huey-Eng Chua; Qing Zhao; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Lisa Tucker-Kellogg; Hanry Yu (BCB, 2011)

Fuse: towards multi-level functional summarization of protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (BCB, 2011)

Multiscale Mathematical Modeling to Support Drug Development. - David Nordsletten; Beracah Yankama; Renato Umeton; V. A. Shiva Ayyadurai; C. Forbes Dewey Jr. (IEEE Trans. Biomed. Eng., 2011)

STEROID: in silico heuristic target combination identification for disease-related signaling networks. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; C. Forbes Dewey Jr. (BCB, 2012)

PANI: an interactive data-driven tool for target prioritization in signaling networks. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; Yingqi Wang; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

In silico identification of endo16 regulators in the sea urchin endomesoderm gene regulatory network. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; Qing Zhao; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

FUSE: a system for data-driven multi-level functional summarization of protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (IHI, 2012)

FACETS: multi-faceted functional decomposition of protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr. (Bioinform., 2012)

FUSE: a profit maximization approach for functional summarization of biological networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr.; Hanry Yu (BMC Bioinform., 2012)

OREMPdb: a semantic dictionary of computational pathway models. - Renato Umeton; Giuseppe Nicosia; C. Forbes Dewey Jr. (BMC Bioinform., 2012)

DualAligner: a dual alignment-based strategy to align protein interaction networks. - Boon-Siew Seah; Sourav S. Bhowmick; C. Forbes Dewey Jr. (Bioinform., 2014)

TENET: topological feature-based target characterization in signalling networks. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; C. Forbes Dewey Jr. (Bioinform., 2015)

TENET: A Machine Learning-Based System for Target Characterization in Signaling Networks. - Huey-Eng Chua; Sourav S. Bhowmick; Lisa Tucker-Kellogg; C. Forbes Dewey Jr. (ICDM Workshops, 2016)

FacetsViewer: A Tool for Multi-faceted Decomposition of Complex Networks. - Boon-Siew Seah; Sourav S. Bhowmick; Huey-Eng Chua; Mengxuan Chen; C. Forbes Dewey Jr. (ICDM Workshops, 2016)