Prediction of regulatory networks: genome-wide identification of transcription factor targets from gene expression data. - Jiang Qian; C. Jimmy Lin; Nicholas M. Luscombe; Haiyuan Yu; Mark Gerstein (Bioinform., 2003)

Characterization of Binding Sites of Eukaryotic Transcription Factors. - Jiang Qian; C. Jimmy Lin; Donald J. Zack (Genom. Proteom. Bioinform., 2006)

Identification of tissue-specific cis-regulatory modules based on interactions between transcription factors. - Xueping Yu; C. Jimmy Lin; Donald J. Zack; Jiang Qian (BMC Bioinform., 2007)

Relating periodicity of nucleosome organization and gene regulation. - Jun Wan 002; C. Jimmy Lin; Donald J. Zack; Jiang Qian (Bioinform., 2009)