Nine Best Practices for Research Software Registries and Repositories: A Concise Guide. - Alain Monteil; Alejandra N. González-Beltrán; Alexandros Ioannidis; Alice Allen; Allen Lee; Anita E. Bandrowski; Bruce E. Wilson; Bryce D. Mecum; Caifan Du; Carly Robinson; Daniel Garijo; Daniel S. Katz; et al. (CoRR, 2020)

Mining Software Entities in Scientific Literature: Document-level NER for an Extremely Imbalance and Large-scale Task. - Patrice Lopez; Caifan Du; Johanna Cohoon; Karthik Ram; James Howison (CIKM, 2021)

CiteAs: Better Software through Sociotechnical Change for Better Software Citation. - Caifan Du; Johanna Cohoon; Jason Priem; Heather A. Piwowar; Casey Meyer; James Howison (CSCW Companion, 2021)

Softcite dataset: A dataset of software mentions in biomedical and economic research publications. - Caifan Du; Johanna Cohoon; Patrice Lopez; James Howison (J. Assoc. Inf. Sci. Technol., 2021)

Voices of Workers: Why a Worker-Centered Approach to Crowd Work Is Challenging. - Caifan Du; Matthew Lease (CoRR, 2022)

Understanding progress in software citation: a study of software citation in the CORD-19 corpus. - Caifan Du; Johanna Cohoon; Patrice Lopez; James Howison (PeerJ Comput. Sci., 2022)

Tales of Transitions: Seeking Scientific Software Sustainability. - Johanna Cohoon; Caifan Du; James Howison (Proc. ACM Hum. Comput. Interact., 2025)

Open source software field research: Spanning social and practice networks for re-entering the field. - Sean P. Goggins; Matt Germonprez; Kevin Lumbard; James Howison; Karthik Ram; Caifan Du (First Monday, 2025)