TrackSigFreq: Subclonal Reconstructions Based on Mutation Signatures and Allele Frequencies. - Caitlin F. Harrigan; Yulia Rubanova; Quaid Morris; Alina Selega (PSB, 2020)

Considerations for Visualizing Uncertainty in Clinical Machine Learning Models. - Caitlin F. Harrigan; Gabriela Morgenshtern; Anna Goldenberg; Fanny Chevalier (CoRR, 2022)

Regional mutational signature activities in cancer genomes. - Caitlin Timmons; Quaid Morris; Caitlin F. Harrigan (PLoS Comput. Biol., 2022)