Meltos: multi-sample tumor phylogeny reconstruction for structural variants. - Camir Ricketts; Daniel Seidman; Victoria Popic; Fereydoun Hormozdiari; Serafim Batzoglou; Iman Hajirasouliha (Bioinform., 2020)

Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses. - Simone Ciccolella; Camir Ricketts; Mauricio Soto Gomez; Murray Patterson; Dana Silverbush; Paola Bonizzoni; Iman Hajirasouliha; Gianluca Della Vedova (Bioinform., 2021)

Empowering Federated Learning for Massive Models with NVIDIA FLARE. - Holger R. Roth; Ziyue Xu 001; Yuan-Ting Hsieh; Adithya Renduchintala; Isaac Yang; Zhihong Zhang 001; Yuhong Wen; Sean Yang; Kevin Lu; Kristopher Kersten; Camir Ricketts; Daguang Xu; et al. (CoRR, 2024)

BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery. - Peter St. John; Dejun Lin; Polina Binder; Malcolm Greaves; Vega Shah; John St. John; Adrian Lange; Patrick D. Hsu; Rajesh Illango; Arvind Ramanathan; Anima Anandkumar; David H. Brookes; et al. (CoRR, 2024)