Next generation software for functional trend analysis. - Gabriel F. Berriz; John E. Beaver; Can Cenik; Murat Tasan; Frederick P. Roth (Bioinform., 2009)

ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq. - Alper Küçükural; Hakan Özadam; Guramrit Singh; Melissa J. Moore; Can Cenik (Bioinform., 2013)

RiboFlow, RiboR and RiboPy: an ecosystem for analyzing ribosome profiling data at read length resolution. - Hakan Özadam; Michael Geng; Can Cenik (Bioinform., 2020)

RiboGraph: an interactive visualization system for ribosome profiling data at read length resolution. - Jonathan Chacko; Hakan Özadam; Can Cenik (Bioinform., 2024)