Network inference from AP-MS data: computational challenges and solutions. - Ben Teng; Can Zhao 007; Xiaoqing Liu; Zengyou He (Briefings Bioinform., 2015)

BagReg: Protein inference through machine learning. - Can Zhao 007; Dao Liu; Ben Teng; Zengyou He (Comput. Biol. Chem., 2015)

A two-step framework for inferring direct protein-protein interaction network from AP-MS data. - Bo Tian; Can Zhao 007; Feiyang Gu; Zengyou He (BMC Syst. Biol., 2017)

Conditional discriminative pattern mining: Concepts and algorithms. - Zengyou He; Feiyang Gu; Can Zhao 007; Xiaoqing Liu; Jun Wu; Ju Wang (Inf. Sci., 2017)

Detecting Statistically Significant Communities. - Zengyou He; Hao Liang; Zheng Chen; Can Zhao 007 (CoRR, 2018)

On the statistical significance of protein complex. - Youfu Su; Can Zhao 007; Zheng Chen; Bo Tian; Zengyou He (Quant. Biol., 2018)

Correlation-Based Community Detection. - Zheng Chen; Zengyou He; Hao Liang; Can Zhao 007; Yan Liu 085 (CoRR, 2019)

Reinforce: An Ensemble Approach for Inferring PPI Network from AP-MS Data. - Bo Tian; Qiong Duan; Can Zhao 007; Ben Teng; Zengyou He (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Computing exact P-values for community detection. - Zengyou He; Hao Liang; Zheng Chen; Can Zhao 007; Yan Liu 085 (Data Min. Knowl. Discov., 2020)

Protein Complexes Identification with Family-Wise Error Rate Control. - Zengyou He; Can Zhao 007; Hao Liang; Bo Xu 008; Quan Zou 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Detecting Statistically Significant Communities. - Zengyou He; Hao Liang; Zheng Chen; Can Zhao 007; Yan Liu 085 (IEEE Trans. Knowl. Data Eng., 2022)