Computational Prediction of MicroRNAs from Toxoplasma gondii Potentially Regulating the Hosts' Gene Expression. - Müserref Duygu Saçar; Caner Bagci; Jens Allmer (Genom. Proteom. Bioinform., 2014)

MAIRA- real-time taxonomic and functional analysis of long reads on a laptop. - Benjamin Albrecht; Caner Bagci; Daniel H. Huson (BMC Bioinform., 2020)