LncFinder: an integrated platform for long non-coding RNA identification utilizing sequence intrinsic composition, structural information and physicochemical property. - Siyu Han; Yanchun Liang 001; Qin Ma 003; Yangyi Xu; Yu Zhang; Wei Du 002; Cankun Wang; Ying Li 004 (Briefings Bioinform., 2019)

IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis. - Brandon Monier; Adam McDermaid; Cankun Wang; Jing Zhao; Allison J. Miller; Anne Fennell; Qin Ma 003 (PLoS Comput. Biol., 2019)

QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data. - Juan Xie; Anjun Ma; Yu Zhang; Bingqiang Liu; Sha Cao; Cankun Wang; Jennifer Xu; Chi Zhang 021; Qin Ma 003 (Bioinform., 2020)

IRIS3: integrated cell-type-specific regulon inference server from single-cell RNA-Seq. - Anjun Ma; Cankun Wang; Yuzhou Chang; Faith H. Brennan; Adam McDermaid; Bingqiang Liu; Chi Zhang 021; Phillip G. Popovich; Qin Ma 003 (Nucleic Acids Res., 2020)

Deep forest ensemble learning for classification of alignments of non-coding RNA sequences based on multi-view structure representations. - Ying Li 004; Qi Zhang 061; Zhaoqian Liu; Cankun Wang; Siyu Han; Qin Ma 003; Wei Du 002 (Briefings Bioinform., 2021)

Machine learning development environment for single-cell sequencing data analyses. - Lei Jiang; Yuexu Jiang; Cankun Wang; Clement Essien; Juexin Wang; Anjun Ma; Qin Ma 003; Dong Xu 002 (BIBM, 2022)

LPInsider: a webserver for lncRNA-protein interaction extraction from the literature. - Ying Li 004; Lizheng Wei; Cankun Wang; Jianing Zhao; Siyu Han; Yu Zhang; Wei Du 002 (BMC Bioinform., 2022)

Enhancer-driven gene regulatory networks inference from single-cell RNA-seq and ATAC-seq data. - Yang Li 089; Anjun Ma; Yizhong Wang; Qi Guo; Cankun Wang; Hongjun Fu; Bingqiang Liu; Qin Ma 003 (Briefings Bioinform., 2024)

CEMIG: prediction of the cis-regulatory motif using the de Bruijn graph from ATAC-seq. - Yizhong Wang; Yang Li 089; Cankun Wang; Chan-Wang Jerry Lio; Qin Ma 003; Bingqiang Liu (Briefings Bioinform., 2024)

A weighted two-stage sequence alignment framework to identify motifs from ChIP-exo data. - Yang Li 089; Yizhong Wang; Cankun Wang; Anjun Ma; Qin Ma 003; Bingqiang Liu (Patterns, 2024)

Global Prescribed-Time Stabilization of a Class of Uncertain Linear Systems With Applications to Aerospace Systems. - Kang-Kang Zhang; Cankun Wang; Chih-Chiang Chen; Okyay Kaynak (IEEE Trans. Aerosp. Electron. Syst., 2024)