Roary: rapid large-scale prokaryote pan genome analysis. - Andrew J. Page; Carla A. Cummins; Martin Hunt; Vanessa K. Wong; Sandra Reuter; Matthew T. G. Holden; Maria Fookes; Daniel Falush; Jacqueline A. Keane; Julian Parkhill (Bioinform., 2015)

The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries. - Lars Barquist; Matthew Mayho; Carla A. Cummins; Amy K. Cain; Christine J. Boinett; Andrew J. Page; Gemma C. Langridge; Michael A. Quail; Jacqueline A. Keane; Julian Parkhill (Bioinform., 2016)

Ensembl 2016. - Andrew D. Yates; Wasiu A. Akanni; M. Ridwan Amode; Daniel Barrell; Konstantinos Billis; Denise Carvalho-Silva; Carla A. Cummins; Peter Clapham; Stephen Fitzgerald; Laurent Gil; Carlos García-Girón; Leo Gordon; et al. (Nucleic Acids Res., 2016)

Ensembl 2017. - Bronwen L. Aken; Premanand Achuthan; Wasiu A. Akanni; M. Ridwan Amode; Friederike Bernsdorff; Jyothish Bhai; Konstantinos Billis; Denise Carvalho-Silva; Carla A. Cummins; Peter Clapham; Laurent Gil; Carlos García-Girón; et al. (Nucleic Acids Res., 2017)

Ensembl 2018. - Daniel R. Zerbino; Premanand Achuthan; Wasiu A. Akanni; M. Ridwan Amode; Daniel Barrell; Jyothish Bhai; Konstantinos Billis; Carla A. Cummins; Astrid Gall; Carlos García-Girón; Laurent Gil; Leo Gordon; et al. (Nucleic Acids Res., 2018)

Ensembl 2019. - Fiona Cunningham; Premanand Achuthan; Wasiu A. Akanni; James E. Allen; M. Ridwan Amode; Irina M. Armean; Ruth Bennett; Jyothish Bhai; Konstantinos Billis; Sanjay Boddu; Carla A. Cummins; Claire Davidson; et al. (Nucleic Acids Res., 2019)

Ensembl Genomes 2020 - enabling non-vertebrate genomic research. - Kevin L. Howe; Bruno Contreras-Moreira; Nishadi De Silva; Gareth Maslen; Wasiu A. Akanni; James E. Allen; Jorge Álvarez-Jarreta; Matthieu Barba; Dan M. Bolser; Lahcen Cambell; Manuel Carbajo; Marc Chakiachvili; et al. (Nucleic Acids Res., 2020)

Ensembl 2020. - Andrew D. Yates; Premanand Achuthan; Wasiu A. Akanni; James E. Allen; Jamie Allen; Jorge Álvarez-Jarreta; M. Ridwan Amode; Irina M. Armean; Andrey G. Azov; Ruth Bennett; Jyothish Bhai; Konstantinos Billis; et al. (Nucleic Acids Res., 2020)

The COVID-19 Data Portal: accelerating SARS-CoV-2 and COVID-19 research through rapid open access data sharing. - Peter W. Harrison; Rodrigo Lopez; Nadim Rahman; Stefan Gutnick Allen; Raheela Aslam; Nicola Buso; Carla A. Cummins; Yasmin Fathy; Eloy Felix; Mihai Glont; Suran Jayathilaka; Sandeep Kadam; et al. (Nucleic Acids Res., 2021)

Ensembl 2021. - Kevin L. Howe; Premanand Achuthan; James E. Allen; Jamie Allen; Jorge Álvarez-Jarreta; M. Ridwan Amode; Irina M. Armean; Andrey G. Azov; Ruth Bennett; Jyothish Bhai; Konstantinos Billis; Sanjay Boddu; et al. (Nucleic Acids Res., 2021)

The European Nucleotide Archive in 2021. - Carla A. Cummins; Alisha Ahamed; Raheela Aslam; Josephine Burgin; Rajkumar Devraj; Ossama Edbali; Dipayan Gupta; Peter W. Harrison; Muhammad Haseeb; Sam Holt; Talal Ibrahim; Eugene Ivanov; et al. (Nucleic Acids Res., 2022)

Ensembl 2022. - Fiona Cunningham; James E. Allen; Jamie Allen; Jorge Álvarez-Jarreta; M. Ridwan Amode; Irina M. Armean; Olanrewaju Austine-Orimoloye; Andrey G. Azov; If Barnes; Ruth Bennett; Andrew E. Berry; Jyothish Bhai; et al. (Nucleic Acids Res., 2022)

The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data. - Nishadi De Silva; Jyothish Bhai; Marc Chakiachvili; Bruno Contreras-Moreira; Carla A. Cummins; Adam Frankish; Astrid Gall; Thiago Augusto Lopes Genez; Kevin L. Howe; Sarah E. Hunt; Fergal J. Martin; Benjamin Moore; et al. (Nucleic Acids Res., 2022)

The European Nucleotide Archive in 2022. - Josephine Burgin; Alisha Ahamed; Carla A. Cummins; Rajkumar Devraj; Khadim Gueye; Dipayan Gupta; Vikas Gupta; Muhammad Haseeb; Maira Ihsan; Eugene Ivanov; Suran Jayathilaka; Vishnukumar Balavenkataraman Kadhirvelu; et al. (Nucleic Acids Res., 2023)