Retrieval and on-the-fly alignment of sequence fragments from the HIV database. - Brian Gaschen; Carla Kuiken; Bette T. Korber; Brian T. Foley (Bioinform., 2001)

The Los Alamos hepatitis C sequence database. - Carla Kuiken; Karina Yusim; Laura Boykin; Russell Richardson (Bioinform., 2005)

Procrastination Leads to Efficient Filtration for Local Multiple Alignment. - Aaron E. Darling; Todd J. Treangen; Louxin Zhang; Carla Kuiken; Xavier Messeguer; Nicole T. Perna (WABI, 2006)

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes. - Anne-Kathrin Schultz; Ming Zhang; Thomas Leitner; Carla Kuiken; Bette T. Korber; Burkhard Morgenstern; Mario Stanke (BMC Bioinform., 2006)

jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1. - Ming Zhang; Anne-Kathrin Schultz; Charles Calef; Carla Kuiken; Thomas Leitner; Bette T. Korber; Burkhard Morgenstern; Mario Stanke (Nucleic Acids Res., 2006)

Web-based design and evaluation of T-cell vaccine candidates. - James Thurmond; Hyejin Yoon; Carla Kuiken; Karina Yusim; Simon Perkins; James Theiler; Tanmoy Bhattacharya 001; Bette T. Korber; Will Fischer 001 (Bioinform., 2008)

The hepatitis C sequence database in Los Alamos. - Carla Kuiken; Peter T. Hraber; James Thurmond; Karina Yusim (Nucleic Acids Res., 2008)

The LANL hemorrhagic fever virus database, a new platform for analyzing biothreat viruses. - Carla Kuiken; James Thurmond; Mira Dimitrijevic; Hyejin Yoon (Nucleic Acids Res., 2012)

Integrated sequence and immunology filovirus database at Los Alamos. - Karina Yusim; Hyejin Yoon; Brian T. Foley; Shihai Feng; Jennifer Macke; Mira Dimitrijevic; Werner Abfalterer; James Szinger; Will Fischer 001; Carla Kuiken; Bette T. Korber (Database J. Biol. Databases Curation, 2016)