Techniques for spatial normalization of diffusion tensor images. - Daniel C. Alexander; Carlo Pierpaoli; Peter J. Basser; James C. Gee (Image Processing, 2000)

Toward Application of Virtual Reality to Visualization of DT-MRI Volumes. - Song Zhang 004; Çagatay Demiralp; M. DaSilva; Daniel F. Keefe; David H. Laidlaw; Benjamin D. Greenberg; Peter J. Basser; Carlo Pierpaoli; E. A. Chiocca; Thomas S. Deisboeck (MICCAI, 2001)

An Immersive Virtual Environment for DT-MRI Volume Visualization Applications: A Case Study. - Song Zhang 004; Çagatay Demiralp; Daniel F. Keefe; M. DaSilva; David H. Laidlaw; Benjamin D. Greenberg; Peter J. Basser; Carlo Pierpaoli; E. A. Chiocca; Thomas S. Deisboeck (IEEE Visualization, 2001)

Spatial Transformations of Diffusion Tensor Magnetic Resonance Images. - Daniel C. Alexander; Carlo Pierpaoli; Peter J. Basser; James C. Gee (IEEE Trans. Medical Imaging, 2001)

A Comprehensive Approach for Multi-channel Image Registration. - Gustavo K. Rohde; Sinisa Pajevic; Carlo Pierpaoli; Peter J. Basser (WBIR, 2003)

A Closed-Form Method for Improving Inter-Subject Coherence in Diffusion Tensor Magnetic Resonance Imaging. - Nicholas Lange; Derek Jones; Carlo Pierpaoli (ISBI, 2004)

Multi-Channel Registration of Diffusion Tensor Images Using Directional Information. - Gustavo K. Rohde; Sinisa Pajevic; Carlo Pierpaoli (ISBI, 2004)

An automatic method for estimating noise-induced signal variance in magnitude-reconstructed magnetic resonance images. - Lin-Ching Chang; Gustavo Kunde Rohde; Carlo Pierpaoli (Image Processing, 2005)

Estimating intensity variance due to noise in registered images. - Gustavo Kunde Rohde; Alan S. Barnett; Peter J. Basser; Carlo Pierpaoli (Image Processing, 2005)

Estimating intensity variance due to noise in registered images: Applications to diffusion tensor MRI. - Gustavo K. Rohde; Alan S. Barnett; Peter J. Basser; Carlo Pierpaoli (NeuroImage, 2005)

Error Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Representations. - Cheng Guan Koay; Lin-Ching Chang; Carlo Pierpaoli; Peter J. Basser (IEEE Trans. Medical Imaging, 2007)

Erratum to "Error Propagation Framework for Diffusion Tensor Imaging via Diffusion Tensor Representations". - Cheng Guan Koay; Lin-Ching Chang; Carlo Pierpaoli; Peter J. Basser (IEEE Trans. Medical Imaging, 2007)

Automatic Deformable Diffusion Tensor Registration for Fiber Population Analysis. - M. Okan Irfanoglu; Raghu Machiraju; Steffen Sammet; Carlo Pierpaoli; Michael V. Knopp (MICCAI (2), 2008)

Comparison of EPI Distortion Correction Methods in Diffusion Tensor MRI Using a Novel Framework. - Minjie Wu; Lin-Ching Chang; Lindsay Walker; Hervé Lemaître; Alan S. Barnett; Stefano Marenco; Carlo Pierpaoli (MICCAI (2), 2008)

The Elliptical Cone of Uncertainty and Its Normalized Measures in Diffusion Tensor Imaging. - Cheng Guan Koay; Uri Nevo; Lin-Ching Chang; Carlo Pierpaoli; Peter J. Basser (IEEE Trans. Medical Imaging, 2008)

In vivo diffusion tensor imaging of the human optic chiasm at sub-millimeter resolution. - Joelle E. Sarlls; Carlo Pierpaoli (NeuroImage, 2009)

Susceptibility Distortion Correction for Echo Planar Images with Non-uniform B-Spline Grid Sampling: A Diffusion Tensor Image Study. - M. Okan Irfanoglu; Lindsay Walker; Steffen Sammet; Carlo Pierpaoli; Raghu Machiraju (MICCAI (2), 2011)

Effects of physiological noise in population analysis of diffusion tensor MRI data. - Lindsay Walker; Lin-Ching Chang; Cheng Guan Koay; Nikhil Sharma 001; Leonardo Cohen; Ragini Verma; Carlo Pierpaoli (NeuroImage, 2011)

Effects of image distortions originating from susceptibility variations and concomitant fields on diffusion MRI tractography results. - M. Okan Irfanoglu; Lindsay Walker; Joelle E. Sarlls; Stefano Marenco; Carlo Pierpaoli (NeuroImage, 2012)

Mean apparent propagator (MAP) MRI: A novel diffusion imaging method for mapping tissue microstructure. - Evren Özarslan; Cheng Guan Koay; Timothy M. Shepherd; Michal E. Komlosh; M. Okan Irfanoglu; Carlo Pierpaoli; Peter J. Basser (NeuroImage, 2013)

DR-BUDDI: Diffeomorphic Registration for Blip Up-Down Diffusion Imaging. - M. Okan Irfanoglu; Pooja Modi; Amritha Nayak; Andrew Knutsen; Joelle E. Sarlls; Carlo Pierpaoli (MICCAI (1), 2014)

DR-BUDDI (Diffeomorphic Registration for Blip-Up blip-Down Diffusion Imaging) method for correcting echo planar imaging distortions. - M. Okan Irfanoglu; Pooja Modi; Amritha Nayak; Elizabeth B. Hutchinson; Joelle E. Sarlls; Carlo Pierpaoli (NeuroImage, 2015)

Analysis of the contribution of experimental bias, experimental noise, and inter-subject biological variability on the assessment of developmental trajectories in diffusion MRI studies of the brain. - Neda Sadeghi; Amritha Nayak; Lindsay Walker; M. Okan Irfanoglu; Paul S. Albert; Carlo Pierpaoli (NeuroImage, 2015)

Harmonization of methods to facilitate reproducibility in medical data processing: Applications to diffusion tensor magnetic resonance imaging. - Jeffrey Jenkins; Lin-Ching Chang; Elizabeth B. Hutchinson; M. Okan Irfanoglu; Carlo Pierpaoli (IEEE BigData, 2016)

Clinical feasibility of using mean apparent propagator (MAP) MRI to characterize brain tissue microstructure. - Alexandru Vlad Avram; Joelle E. Sarlls; Alan S. Barnett; Evren Özarslan; Cibu Thomas; M. Okan Irfanoglu; Elizabeth B. Hutchinson; Carlo Pierpaoli; Peter J. Basser (NeuroImage, 2016)

DR-TAMAS: Diffeomorphic Registration for Tensor Accurate Alignment of Anatomical Structures. - M. Okan Irfanoglu; Amritha Nayak; Jeffrey Jenkins; Elizabeth B. Hutchinson; Neda Sadeghi; Cibu Thomas; Carlo Pierpaoli (NeuroImage, 2016)

Tract Orientation and Angular Dispersion Deviation Indicator (TOADDI): A framework for single-subject analysis in diffusion tensor imaging. - Cheng Guan Koay; Ping Hong Yeh; John M. Ollinger; M. Okan Irfanoglu; Carlo Pierpaoli; Peter J. Basser; Terrence R. Oakes; Gerard Riedy (NeuroImage, 2016)

Impact of time-of-day on brain morphometric measures derived from T1-weighted magnetic resonance imaging. - Aaron Trefler; Neda Sadeghi; Adam G. Thomas; Carlo Pierpaoli; Chris I. Baker; Cibu Thomas (NeuroImage, 2016)

The diffusion tensor imaging (DTI) component of the NIH MRI study of normal brain development (PedsDTI). - Lindsay Walker; Lin-Ching Chang; Amritha Nayak; M. Okan Irfanoglu; Kelly N. Botteron; James McCracken; Robert C. McKinstry; Michael J. Rivkin; Dah-Jyuu Wang; Judith Rumsey; Carlo Pierpaoli (NeuroImage, 2016)

Population based MRI and DTI templates of the adult ferret brain and tools for voxelwise analysis. - Elizabeth B. Hutchinson; Susan C. Schwerin; Kryslaine Radomski; Neda Sadeghi; Jeffrey Jenkins; Michal E. Komlosh; M. Okan Irfanoglu; Sharon L. Juliano; Carlo Pierpaoli (NeuroImage, 2017)

Impact of time-of-day on diffusivity measures of brain tissue derived from diffusion tensor imaging. - Cibu Thomas; Neda Sadeghi; Amritha Nayak; Aaron Trefler; Joelle E. Sarlls; Chris I. Baker; Carlo Pierpaoli (NeuroImage, 2018)

Direct and specific assessment of axonal injury and spinal cord microenvironments using diffusion correlation imaging. - Dan Benjamini; Elizabeth B. Hutchinson; Michal E. Komlosh; Courtney J. Comrie; Susan C. Schwerin; Guofeng Zhang 018; Carlo Pierpaoli; Peter J. Basser (NeuroImage, 2020)