MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes. - Carlos A. Ruiz-Perez; Roth E. Conrad; Konstantinos T. Konstantinidis (BMC Bioinform., 2021)

RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity. - Kenji Gerhardt; Carlos A. Ruiz-Perez; Luis M. Rodriguez-R; Roth E. Conrad; Konstantinos T. Konstantinidis (Frontiers Bioinform., 2021)