Benchmarking Parallel K-Means Cloud Type Clustering from Satellite Data. - Carlos Barajas; Pei Guo; Lipi Mukherjee; Susan Hoban; Jianwu Wang 001; Daeho Jin; Aryya Gangopadhyay; Matthias K. Gobbert (Bench, 2018)

Hybrid MPI+OpenMP parallelization of image reconstruction in proton beam therapy on multi-core and many-core processors. - James Della-Giustina; Carlos Barajas; Matthias K. Gobbert; Dennis S. Mackin; Jerimy Polf (SpringSim (HPC), 2018)

Genetic Circuit-Host Ribosome Transactions: Diffusion-Reaction Model. - Carlos Barajas; Domitilla Del Vecchio (ACC, 2019)

Performance Benchmarking of Data Augmentation and Deep Learning for Tornado Prediction. - Carlos A. Barajas; Matthias K. Gobbert; Jianwu Wang 001 (IEEE BigData, 2019)

Effects of spatial heterogeneity on bacterial genetic circuits. - Carlos Barajas; Domitilla Del Vecchio (PLoS Comput. Biol., 2020)

Promising Hyperparameter Configurations for Deep Fully Connected Neural Networks to Improve Image Reconstruction in Proton Radiotherapy. - Sokhna A. York; Alina M. Ali; David C. Lashbrooke; Rodrigo Yepez-Lopez; Carlos A. Barajas; Matthias K. Gobbert; Jerimy C. Polf (IEEE BigData, 2021)

Classification of Compton Camera Based Prompt Gamma Imaging for Proton Radiotherapy by Random Forests. - Carlos A. Barajas; Gerson C. Kroiz; Matthias K. Gobbert; Jerimy C. Polf (CSCI, 2021)

Performance Benchmarking of Parallel Hyperparameter Tuning for Deep Learning Based Tornado Predictions. - Jonathan N. Basalyga; Carlos A. Barajas; Matthias K. Gobbert; Jianwu Wang 001 (Big Data Res., 2021)

Multi-Layer Recurrent Neural Networks for the Classification of Compton Camera Based Imaging Data for Proton Beam Cancer Treatment. - Joseph Clark; Anaise Gaillard; Justin Koe; Nithya Navarathna; Daniel J. Kelly; Matthias K. Gobbert; Carlos A. Barajas; Jerimy C. Polf (BDCAT, 2022)

Accelerating Real-Time Imaging for Radiotherapy: Leveraging Multi-GPU Training with PyTorch. - Ruth Obe; Brandt Kaufmann; Kaelen Baird; Sam Kadel; Yasmin Soltani; Mostafa Cham; Matthias K. Gobbert; Carlos A. Barajas; Zhuoran Jiang; Vijay R. Sharma; Lei Ren; Stephen W. Peterson; et al. (ICMLA, 2023)

Improving Gamma Imaging in Proton Therapy by Sanitizing Compton Camera Simulated Patient Data using Neural Networks through the BRIDE Pipeline. - Michael O. Chen; Julian Hodge; Peter L. Jin; Ella Protz; Elizabeth Wong; Ruth Obe; Ehsan Shakeri; Mostafa Cham; Matthias K. Gobbert; Carlos A. Barajas; Vijay R. Sharma; Sina Mossahebi; et al. (IEEE Big Data, 2024)

Addressing Mode Collapse in Trajectory Prediction: A Maneuver-Oriented Metric and Approach. - Carlos Barajas; Gianoberto Giampieri; Stefano Sabatini; Nicola Poerio (IV, 2024)