Budding yeast cell cycle modeled by context-sensitive probabilistic Boolean network. - Ronaldo Fumio Hashimoto; Henrique Stagni; Carlos H. A. Higa (GENSiPS, 2009)

Inference of gene regulatory network using temporal coefficient of determination obtained from ergodic Markov chains. - Carlos H. A. Higa; Ronaldo Fumio Hashimoto; Roberto Hirata Jr.; Nina S. T. Hirata; Carlos S. Santos (GENSiPS, 2009)

Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data. - Carlos H. A. Higa; Vitor H. P. Louzada; Ronaldo Fumio Hashimoto (ISBRA, 2010)

Inference of gene regulatory networks using the seed growing paradigm. - Carlos Henrique Aguena Higa (2012)

Growing Seed Genes from Time Series Data and Thresholded Boolean Networks with Perturbation. - Carlos H. A. Higa; Tales P. Andrade; Ronaldo Fumio Hashimoto (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

The Maximum Similarity Partitioning Problem and its Application in the Transcriptome Reconstruction and Quantification Problem. - Alex Z. Zaccaron; Said Sadique Adi; Carlos H. A. Higa; Eloi Araujo; Burton H. Bluhm (ICCSA (1), 2015)

Inference of Gene Regulatory Networks Using Coefficient of Determination, Tsallis Entropy and Biological Prior Knowledge. - Camila Y. Koike; Carlos H. A. Higa (BIBE, 2016)

Inferring Gene Regulatory Networks Using Hybrid Parallel Computing. - Jean C. W. K. Ma; Marco Aurelio Stefanes; Carlos H. A. Higa; Luiz C. S. Rozante (ICCSA (1), 2018)

Reverse Engineering of Gene Regulatory Networks Combining Dynamic Bayesian Networks and Prior Biological Knowledge. - Mariana Caravanti de Souza; Carlos H. A. Higa (ICCSA (1), 2018)

Matrices inducing generalized metric on sequences. - Eloi Araujo; Fábio Viduani Martinez; Carlos H. A. Higa; José Soares (Discret. Appl. Math., 2023)