CONFAC: automated application of comparative genomic promoter analysis to DNA microarray datasets. - Suresh Karanam; Carlos Sanchez Moreno (Nucleic Acids Res., 2004)

Genomic Promoter Analysis Predicts Functional Transcription Factor Binding. - J. Sunil Rao; Suresh Karanam; Colleen D. McCabe; Carlos Sanchez Moreno (Adv. Bioinformatics, 2008)

An Integrative Approach for In Silico Glioma Research. - Lee A. D. Cooper; Jun Kong 002; David A. Gutman; Fusheng Wang 001; Sharath R. Cholleti; Tony C. Pan; Patrick M. Widener; Ashish Sharma 001; Tom Mikkelsen; Adam E. Flanders; Daniel L. Rubin; Erwin G. Van Meir; et al. (IEEE Trans. Biomed. Eng., 2010)

In silico analysis of nuclei in glioblastoma using large-scale microscopy images improves prediction of treatment response. - Jun Kong 002; Lee Cooper 001; Carlos Sanchez Moreno; Fusheng Wang 001; Tahsin M. Kurç; Joel H. Saltz; Daniel J. Brat (EMBC, 2011)

Morphological signatures and genomic correlates in glioblastoma. - Lee A. D. Cooper; Jun Kong 002; Fusheng Wang 001; Tahsin M. Kurç; Carlos Sanchez Moreno; Daniel J. Brat; Joel H. Saltz (ISBI, 2011)

A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas. - Jun Kong 002; Lee Cooper 001; Fusheng Wang 001; Candace Chisolm; Carlos Sanchez Moreno; Tahsin M. Kurç; Patrick M. Widener; Daniel J. Brat; Joel H. Saltz (ISBI, 2011)

Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes. - Jun Kong 002; Lee A. D. Cooper; Fusheng Wang 001; David A. Gutman; Jingjing Gao; Candace Chisolm; Ashish Sharma 001; Tony Pan; Erwin G. Van Meir; Tahsin M. Kurç; Carlos Sanchez Moreno; Joel H. Saltz; et al. (IEEE Trans. Biomed. Eng., 2011)

Integrated morphologic analysis for the identification and characterization of disease subtypes. - Lee A. D. Cooper; Jun Kong 002; David A. Gutman; Fusheng Wang 001; Jingjing Gao; Christina Appin; Sharath R. Cholleti; Tony Pan; Ashish Sharma 001; Lisa Scarpace; Tom Mikkelsen; Tahsin M. Kurç; et al. (J. Am. Medical Informatics Assoc., 2012)

High-performance computational analysis of glioblastoma pathology images with database support identifies molecular and survival correlates. - Jun Kong 002; Fusheng Wang 001; George Teodoro; Lee Cooper 001; Carlos Sanchez Moreno; Tahsin M. Kurç; Tony Pan; Joel H. Saltz; Daniel J. Brat (BIBM, 2013)

The OncoPPi Portal: an integrative resource to explore and prioritize protein-protein interactions for cancer target discovery. - Andrei A. Ivanov; Brian Revennaugh; Lauren Rusnak; Valentina Gonzalez-Pecchi; Xiulei Mo; Margaret A. Johns; Yuhong Du; Lee A. D. Cooper; Carlos Sanchez Moreno; Fadlo R. Khuri; Haian Fu (Bioinform., 2018)