Unbiased comparison of alignment tools for splice junction detection from RNA-Seq data. - Alberto Gatto; Fátima Sánchez-Cabo; Carlos Torroja Fungairino; Enrique Lara Pezzi (IWBBIO, 2013)

ATtRACT - a database of RNA-binding proteins and associated motifs. - Girolamo Giudice; Fátima Sánchez-Cabo; Carlos Torroja Fungairino; Enrique Lara Pezzi (Database J. Biol. Databases Curation, 2016)

SpatialDDLS: an R package to deconvolute spatial transcriptomics data using neural networks. - Diego Mañanes; Inés Rivero-García; Carlos Relaño; Miguel Torres; David Sancho; Daniel Jimenez-Carretero; Carlos Torroja Fungairino; Fátima Sánchez-Cabo (Bioinform., 2024)