Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms. - Yuanyuan Xiao; Mark R. Segal; Eugene Andres Houseman; Joseph Wiemels; John K. Wiencke; Shichun Zheng; Margaret R. Wrensch; Brock C. Christensen; Carmen J. Marsit; Karl T. Kelsey; Heather H. Nelson; Margaret R. Karagas; et al. (BMEI (1), 2008)

Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions. - Eugene Andres Houseman; Brock C. Christensen; Ru-Fang Yeh; Carmen J. Marsit; Margaret R. Karagas; Margaret R. Wrensch; Heather H. Nelson; Joseph Wiemels; Shichun Zheng; John K. Wiencke; Karl T. Kelsey (BMC Bioinform., 2008)

Copy number variation has little impact on bead-array-based measures of DNA methylation. - Eugene Andres Houseman; Brock C. Christensen; Margaret R. Karagas; Margaret R. Wrensch; Heather H. Nelson; Joseph Wiemels; Shichun Zheng; John K. Wiencke; Karl T. Kelsey; Carmen J. Marsit (Bioinform., 2009)

Semi-supervised recursively partitioned mixture models for identifying cancer subtypes. - Devin C. Koestler; Carmen J. Marsit; Brock C. Christensen; Margaret R. Karagas; Raphael Bueno; David J. Sugarbaker; Karl T. Kelsey; Eugene Andres Houseman (Bioinform., 2010)

DNA methylation arrays as surrogate measures of cell mixture distribution. - Eugene Andres Houseman; William P. Accomando; Devin C. Koestler; Brock C. Christensen; Carmen J. Marsit; Heather H. Nelson; John K. Wiencke; Karl T. Kelsey (BMC Bioinform., 2012)

Reference-free cell mixture adjustments in analysis of DNA methylation data. - Eugene Andres Houseman; John Molitor; Carmen J. Marsit (Bioinform., 2014)

Cell-composition effects in the analysis of DNA methylation array data: a mathematical perspective. - Eugene Andres Houseman; Karl T. Kelsey; John K. Wiencke; Carmen J. Marsit (BMC Bioinform., 2015)

Reference-free deconvolution of DNA methylation data and mediation by cell composition effects. - Eugene Andres Houseman; Molly L. Kile; David C. Christiani; Tan A. Ince; Karl T. Kelsey; Carmen J. Marsit (BMC Bioinform., 2016)

A Methylation-to-Expression Feature Model for Generating Accurate Prognostic Risk Scores and Identifying Disease Targets in Clear Cell Kidney Cancer. - Jeffrey A. Thompson; Carmen J. Marsit (PSB, 2017)

Environmental Health Language Collaborative (EHLC): a Route to Environmental Health Science Data Harmonization. - Anna Maria Masci; Stephanie Holmgren; Charles Schmitt; Rima Habre; Anne E. Thessen; Rebecca Boyles; Carmen J. Marsit (ICBO, 2022)

Transcriptome- and DNA methylation-based cell-type deconvolutions produce similar estimates of differential gene expression and differential methylation. - Emily R. Hannon; Carmen J. Marsit; Arlene E. Dent; Paula Embury; Sidney Ogolla; David Midem; Scott M. Williams; James W. Kazura (BioData Min., 2024)