Comparative Genomics Tools Applied to Bioterrorism Defence. - Tom Slezak; Tom Kuczmarski; Linda L. Ott; Clinton Torres; Dan Medeiros; Jason Smith 002; Brian Truitt; Nisha Mulakken; Marisa Lam; Elizabeth A. Vitalis; Adam T. Zemla; Carol L. Ecale Zhou; et al. (Briefings Bioinform., 2003)

Computational approaches for identification of conserved/unique binding pockets in the A chain of ricin. - Carol L. Ecale Zhou; Adam T. Zemla; Diana C. Roe; Malin M. Young; Marisa Lam; Joseph S. Schoeniger; Rod Balhorn (Bioinform., 2005)

AS2TS system for protein structure modeling and analysis. - Adam T. Zemla; Carol L. Ecale Zhou; Tom Slezak; Tom Kuczmarski; D. Rama; Clinton Torres; D. Sawicka; Daniel Barsky (Nucleic Acids Res., 2005)

MannDB - A microbial database of automated protein sequence analyses and evidence integration for protein characterization. - Carol L. Ecale Zhou; Marisa Lam; Jason Smith 002; Adam T. Zemla; Matthew D. Dyer; Thomas A. Kuczmarski; Elizabeth A. Vitalis; Thomas R. Slezak (BMC Bioinform., 2006)

MvirDB - a microbial database of protein toxins, virulence factors and antibiotic resistance genes for bio-defence applications. - Carol L. Ecale Zhou; Jason Smith 002; Marisa Lam; Adam T. Zemla; Matthew D. Dyer; Tom Slezak (Nucleic Acids Res., 2007)

SpaK/SpaR Two-component System Characterized by a Structure-driven Domain-fusion Method and in Vitro Phosphorylation Studies. - Anu Chakicherla; Carol L. Ecale Zhou; Martha Ligon Dang; Virginia Rodriguez; J. Norman Hansen; Adam T. Zemla (PLoS Comput. Biol., 2009)

StralSV: assessment of sequence variability within similar 3D structures and application to polio RNA-dependent RNA polymerase. - Adam T. Zemla; Dorothy M. Lang; Tanya Kostova; Raul Andino; Carol L. Ecale Zhou (BMC Bioinform., 2011)

Protein Sequence Annotation Tool (PSAT): a centralized web-based meta-server for high-throughput sequence annotations. - Elo Leung; Amy Huang; Eithon Cadag; Aldrin Montana; Jan Lorenz Soliman; Carol L. Ecale Zhou (BMC Bioinform., 2016)

multiPhATE: bioinformatics pipeline for functional annotation of phage isolates. - Carol L. Ecale Zhou; Stephanie Malfatti; Jeffrey A. Kimbrel; Casandra Philipson; Katelyn McNair; Theron Hamilton; Robert A. Edwards; Brian Souza (Bioinform., 2019)