Tools for the SBML Community. - Colin S. Gillespie; Darren J. Wilkinson; Carole J. Proctor; Daryl P. Shanley; Richard J. Boys; Thomas B. L. Kirkwood (Bioinform., 2006)

BASIS: an internet resource for network modelling. - Colin S. Gillespie; Darren J. Wilkinson; Daryl P. Shanley; Carole J. Proctor; Richard J. Boys; Thomas B. L. Kirkwood (J. Integr. Bioinform., 2006)

An in silico model of the ubiquitin-proteasome system that incorporates normal homeostasis and age-related decline. - Carole J. Proctor; Maria Tsirigotis; Douglas A. Gray 002 (BMC Syst. Biol., 2007)

Explaining oscillations and variability in the p53-Mdm2 system. - Carole J. Proctor; Douglas A. Gray 002 (BMC Syst. Biol., 2008)

Experimental and Computational Analysis of Polyglutamine-Mediated Cytotoxicity. - Matthew Y. Tang; Carole J. Proctor; John Woulfe; Douglas A. Gray 002 (PLoS Comput. Biol., 2010)

PyCoTools: a Python toolbox for COPASI. - Ciaran M. Welsh; Nicola Fullard; Carole J. Proctor; Alvaro Martinez-Guimera; Robert J. Isfort; Charles C. Bascom; Ryan Tasseff; Stefan A. Przyborski; Daryl P. Shanley (Bioinform., 2018)

Systems biology reveals how altered TGFβ signalling with age reduces protection against pro-inflammatory stimuli. - David Hodgson; Andrew D. Rowan; Francesco Falciani; Carole J. Proctor (PLoS Comput. Biol., 2019)

TimiRGeN: R/Bioconductor package for time series microRNA-mRNA integration and analysis. - Krutik Patel; S. Chandrasegaran; I M. Clark; Carole J. Proctor; D. A. Young; Daryl P. Shanley (Bioinform., 2021)