An artificial t cell immune system for predicting MHC-II binding peptides. - Carsten Henneges; Stefan Huster; Andreas Zell (ALIFE, 2009)

Practical Graph Isomorphism for Graphlet Data Mining in Protein Structures. - Carsten Henneges; Christoph Behle; Andreas Zell (IJCCI (Selected Papers), 2010)

Graphlet Data Mining of Energetical Interaction Patterns in Protein 3D Structures. - Carsten Henneges; Marc Röttig; Oliver Kohlbacher; Andreas Zell (IJCCI (ICFC-ICNC), 2010)

A factorization method for the classification of infrared spectra. - Carsten Henneges; Pavel Laskov; Endang Darmawan; Juergen Backhaus; Bernd Kammerer; Andreas Zell (BMC Bioinform., 2010)

Feature Selection and Data Mining for Proteomics and Metabolomics. - Carsten Henneges (2011)

GameRank: R package for feature selection and construction. - Carsten Henneges; Joseph N. Paulson (Bioinform., 2022)