Mining the Biomedical Literature for Genic Information. - Catalina O. Tudor; K. Vijay-Shanker; Carl J. Schmidt (BioNLP, 2008)

eGIFT: Mining Gene Information from the Literature. - Catalina O. Tudor; Carl J. Schmidt; K. Vijay-Shanker (BMC Bioinform., 2010)

Robust segmentation of biomedical figures for image-based document retrieval. - Luis D. Lopez; Jingyi Yu; Catalina O. Tudor; Cecilia N. Arighi; Hongzhan Huang; K. Vijay-Shanker; Cathy H. Wu (BIBM, 2012)

iSimp: A sentence simplification system for biomedicail text. - Yifan Peng 002; Catalina O. Tudor; Manabu Torii; Cathy H. Wu; K. Vijay-Shanker (BIBM, 2012)

Pathway curation: Application of text-mining tools eGIFT and RLIMS-P. - Carl J. Schmidt; Liang Sun; Cecilia N. Arighi; Keith Decker; K. Vijay-Shanker; Manabu Torii; Catalina O. Tudor; Cathy H. Wu; Peter D'Eustachio (BIBM Workshops, 2012)

RankPref: Ranking Sentences Describing Relations between Biomedical Entities with an Application. - Catalina O. Tudor; K. Vijay-Shanker (BioNLP@HLT-NAACL, 2012)

Developing a biocuration workflow for AgBase, a non-model organism database. - Lakshmi R. Pillai; Philippe Chouvarine; Catalina O. Tudor; Carl J. Schmidt; K. Vijay-Shanker; Fiona M. McCarthy (Database J. Biol. Databases Curation, 2012)

The eFIP system for text mining of protein interaction networks of phosphorylated proteins. - Catalina O. Tudor; Cecilia N. Arighi; Qinghua Wang 003; Cathy H. Wu; K. Vijay-Shanker (Database J. Biol. Databases Curation, 2012)

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task. - Cecilia N. Arighi; Ben Carterette; K. Bretonnel Cohen; Martin Krallinger; W. John Wilbur; Petra Fey; Robert J. Dodson; Laurel Cooper; Ceri E. Van Slyke; Wasila M. Dahdul; Paula M. Mabee; Donghui Li; et al. (Database J. Biol. Databases Curation, 2013)

A framework for biomedical figure segmentation towards image-based document retrieval. - Luis D. Lopez; Jingyi Yu; Cecilia N. Arighi; Catalina O. Tudor; Manabu Torii; Hongzhan Huang; K. Vijay-Shanker; Cathy H. Wu (BMC Syst. Biol., 2013)

Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis. - Karen Ross; Catalina O. Tudor; Gang Li 021; Ruoyao Ding; Irem Çelen; Julie Cowart; Cecilia N. Arighi; Darren A. Natale; Cathy H. Wu (ICBO, 2014)

iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system. - Yifan Peng 002; Catalina O. Tudor; Manabu Torii; Cathy H. Wu; K. Vijay-Shanker (Database J. Biol. Databases Curation, 2014)

Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system. - Catalina O. Tudor; Karen E. Ross; Gang Li 021; K. Vijay-Shanker; Cathy H. Wu; Cecilia N. Arighi (Database J. Biol. Databases Curation, 2015)

miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases. - Samir Gupta; Karen E. Ross; Catalina O. Tudor; Cathy H. Wu; Carl J. Schmidt; K. Vijay-Shanker (J. Biomed. Semant., 2016)

WebGIVI: a web-based gene enrichment analysis and visualization tool. - Liang Sun; Yongnan Zhu; A. S. M. Ashique Mahmood; Catalina O. Tudor; Jia Ren; K. Vijay-Shanker; Jian Chen 006; Carl J. Schmidt (BMC Bioinform., 2017)