Analysing the Heterogeneity of Rule-Based EHR Phenotyping Algorithms in CALIBER and the UK Biobank. - Spiros C. Denaxas; Helen Parkinson; Natalie K. Fitzpatrick; Cathie Sudlow; Harry Hemingway (KDH@IJCAI, 2019)

Text mining brain imaging reports. - Beatrice Alex; Claire Grover; Richard Tobin; Cathie Sudlow; Grant Mair; William Whiteley (J. Biomed. Semant., 2019)

Named Entity Recognition for Electronic Health Records: A Comparison of Rule-based and Machine Learning Approaches. - Philip John Gorinski; Honghan Wu; Claire Grover; Richard Tobin; Conn Talbot; Heather Whalley; Cathie Sudlow; William Whiteley; Beatrice Alex (CoRR, 2019)

Contextualised concept embedding for efficiently adapting natural language processing models for phenotype identification. - Honghan Wu; Karen Hodgson; Sue Dyson; Katherine I. Morley; Zina M. Ibrahim; Ehtesham Iqbal 001; Robert Stewart 002; Richard J. B. Dobson; Cathie Sudlow (CoRR, 2019)

UK phenomics platform for developing and validating electronic health record phenotypes: CALIBER. - Spiros C. Denaxas; Arturo Gonzalez-Izquierdo; Kenan Direk; Natalie K. Fitzpatrick; Ghazaleh Fatemifar; Amitava Banerjee; Richard J. B. Dobson; Laurence J. Howe; Valerie Kuan; R. Tom Lumbers; Laura Pasea; Riyaz S. Patel; et al. (J. Am. Medical Informatics Assoc., 2019)

A validated natural language processing algorithm for brain imaging phenotypes from radiology reports in UK electronic health records. - Emily Wheater; Grant Mair; Cathie Sudlow; Beatrice Alex; Claire Grover; William Whiteley (BMC Medical Informatics Decis. Mak., 2019)

Hierarchical complexity of the adult human structural connectome. - Keith Smith; Mark E. Bastin; Simon R. Cox; Maria del Carmen Valdés Hernández; Stewart Wiseman; Javier Escudero; Catherine Sudlow (NeuroImage, 2019)

Knowledge Driven Phenotyping. - Honghan Wu; Minhong Wang 002; Qianyi Zeng; Wenjun Chen; Thomas Nind; Emily R. Jefferson; Marion Bennie; Corri Black; Jeff Z. Pan; Cathie Sudlow; Dave Robertson 001 (MIE, 2020)

Benchmarking network-based gene prioritization methods for cerebral small vessel disease. - Huayu Zhang; Amy Ferguson; Grant Robertson; Muchen Jiang; Teng Zhang; Cathie Sudlow; Keith Smith; Kristiina Rannikmäe; Honghan Wu (Briefings Bioinform., 2021)

Developing automated methods for disease subtyping in UK Biobank: an exemplar study on stroke. - Kristiina Rannikmäe; Honghan Wu; Steven Tominey; William Whiteley; Naomi Allen; Cathie Sudlow (BMC Medical Informatics Decis. Mak., 2021)

Comparison of rule-based and neural network models for negation detection in radiology reports. - D. Sykes; Andreas Grivas; Claire Grover; Richard Tobin; Cathie Sudlow; William Whiteley; Andrew M. McIntosh; Heather Whalley; Beatrice Alex (Nat. Lang. Eng., 2021)

A survey on clinical natural language processing in the United Kingdom from 2007 to 2022. - Honghan Wu; Minhong Wang 002; Jinge Wu; Farah Francis; Yun-Hsuan Chang; Alex Shavick; Hang Dong 002; Michael Tin Chung Poon; Natalie K. Fitzpatrick; Adam P. Levine; Luke T. Slater; Alex Handy; et al. (npj Digit. Medicine, 2022)

Harmonising electronic health records for reproducible research: challenges, solutions and recommendations from a UK-wide COVID-19 research collaboration. - Hoda Abbasizanjani; Fatemeh Torabi; Stuart Bedston; Thomas Bolton 002; Gareth Davies 005; Spiros C. Denaxas; Rowena Griffiths; Laura Herbert; Sam Hollings; Spencer Keene; Kamlesh Khunti; Emily Lowthian; et al. (BMC Medical Informatics Decis. Mak., 2023)