Multi-Study Boosting: Theoretical Considerations for Merging vs. Ensembling. - Cathy Shyr; Pragya Sur; Giovanni Parmigiani; Prasad Patil (CoRR, 2022)

Identifying and Extracting Rare Disease Phenotypes with Large Language Models. - Cathy Shyr; Yan Hu; Paul A. Harris; Hua Xu 001 (CoRR, 2023)

Empowering the biomedical research community: Innovative SAS deployment on the All of Us Researcher Workbench. - Izabelle P. Humes; Cathy Shyr; Moira Dillon; Zhongjie Liu; Jennifer Peterson; Chris De St. Jeor; Jacqueline Malkes; Hiral Master; Brandy Mapes; Romuladus Azuine; Nakia Mack; Bassent Abdelbary; et al. (J. Am. Medical Informatics Assoc., 2024)

Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency. - Cathy Shyr; Randall W. Grout; Nan Kennedy; Yasemin Akdas; Maeve Tischbein; Joshua Milford; Jason Tan; Kaysi Quarles; Terri L. Edwards; Laurie L. Novak; Jules White; Consuelo H. Wilkins; et al. (J. Am. Medical Informatics Assoc., 2024)

Illuminating the landscape of high-level clinical trial opportunities in the All of Us Research Program. - Cathy Shyr; Lina Sulieman; Paul A. Harris (J. Am. Medical Informatics Assoc., 2024)

Identifying and Extracting Rare Diseases and Their Phenotypes with Large Language Models. - Cathy Shyr; Yan Hu; Lisa Bastarache; Alex Cheng; Rizwan Hamid; Paul A. Harris; Hua Xu 001 (J. Heal. Informatics Res., 2024)

Reply to Layne et al.'s Letter to the Editor. - Cathy Shyr; Paul A. Harris (J. Am. Medical Informatics Assoc., 2025)