A compartment based model for the formation of 2-LTR circles after raltegravir intensification. - E. Fabian Cardozo; Cesar Augusto Vargas Garcia; Ryan Zurakowski (CDC, 2012)

Stochastic analysis and inference of a two-state genetic promoter model. - Abhyudai Singh; Cesar Augusto Vargas Garcia; Rajesh Karmakar (ACC, 2013)

Conditions for invasion of synapse-forming HIV variants. - Cesar Augusto Vargas Garcia; Ryan Zurakowski; Abhyudai Singh (CDC, 2013)

Stochastic analysis of genetic promoter architectures with memory. - Abhyudai Singh; Cesar Augusto Vargas Garcia; Rajesh Karmakar (CDC, 2013)

Approximate statistical dynamics of a genetic feedback circuit. - Mohammad Soltani; Cesar Augusto Vargas Garcia; Niraj Kumar 006; Rahul V. Kulkarni; Abhyudai Singh (ACC, 2015)

Conditional Moment Closure Schemes for Studying Stochastic Dynamics of Genetic Circuits. - Mohammad Soltani; Cesar Augusto Vargas Garcia; Abhyudai Singh (IEEE Trans. Biomed. Circuits Syst., 2015)

Prospective HIV clinical trial comparison by expected Kullback-Leibler Divergence. - Lamont Cannon; Cesar Augusto Vargas Garcia; Michael J. Piovoso; Ryan Zurakowski (ACC, 2016)

Stochastic hybrid systems approach to modeling dynamics of cell size. - Cesar Augusto Vargas Garcia; Mohammad Soltani; Abhyudai Singh (CDC, 2016)

Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes. - Mohammad Soltani; Cesar Augusto Vargas Garcia; Duarte Antunes; Abhyudai Singh (PLoS Comput. Biol., 2016)

Optimal adsorption rate: Implications of the shielding effect. - Cesar Augusto Vargas Garcia; Carl Agbemabiese; Abhyudai Singh (ACC, 2017)

The effect of multiplicity of infection on the temperateness of a bacteriophage: Implications for viral fitness. - Joshua A. Blotnick; Cesar Augusto Vargas Garcia; John J. Dennehy; Ryan Zurakowski; Abhyudai Singh (CDC, 2017)

Implications of measurement assay type in design of HIV experiments. - LaMont Cannon; Aditya Jagarapu; Cesar Augusto Vargas Garcia; Michael J. Piovoso; Ryan Zurakowski (CDC, 2017)

Elucidating Cell Size Control Mechanisms with Stochastic Hybrid Systems. - Cesar Augusto Vargas Garcia; Abhyudai Singh (CDC, 2018)

Efficient computation of stochastic cell-size transient dynamics. - Cesar Augusto Nieto-Acuna; Cesar Augusto Vargas Garcia; Abhyudai Singh; Juan Manuel Pedraza (BMC Bioinform., 2019)

Stochastic stability of a cell cycle model with "silence period". - Yao Li; Cesar Augusto Vargas Garcia; Abhyudai Singh (ECC, 2020)

Parasite-Guest Infection Modeling: Social Science Applications. - Cesar Vargas-García; Jenny-Paola Lis-Gutiérrez; Mercedes Gaitán-Angulo; Melissa Lis-Gutiérrez (ICSI, 2020)

A Population-Based Approach to Study the Effects of Growth and Division Rates on the Dynamics of Cell Size Statistics. - Niccoló Totis; César Nieto; Armin Küper; Cesar Augusto Vargas Garcia; Abhyudai Singh; Steffen Waldherr (IEEE Control. Syst. Lett., 2021)

Threshold-crossing time statistics for size-dependent gene expression in growing cells. - César Nieto; Khem Raj Ghusinga; Cesar Vargas-García; Abhyudai Singh (ACC, 2022)

Sequestration-based feedback control of blood platelet levels. - Supravat Dey; Cesar Augusto Vargas Garcia; Abhyudai Singh (CDC, 2022)

Cell size control shapes fluctuations in colony population. - César Nieto; César Vargas-García; Juan Manuel Pedraza; Abhyudai Singh (CDC, 2022)

A Moments-Based Analytical Approach for Cell Size Homeostasis. - César Nieto; Cesar Augusto Vargas Garcia; Abhyudai Singh (IEEE Control. Syst. Lett., 2024)

Inferring Cell Size Control Mechanisms Through Stochastic Hybrid Modeling. - Sayeh Rezaee; César Nieto; Cesar Augusto Vargas Garcia; Abhyudai Singh (ACC, 2025)

Joint Distribution Dynamics of Cell Cycle Variables in Exponentially-Growing Cells with Stochastic Division. - César Nieto; Sayeh Rezaee; Cesar Augusto Vargas Garcia; Abhyudai Singh (MED, 2025)