An assessment of bioinformatics tools for the detection of human endogenous retroviral insertions in short-read genome sequencing data. - Harry Bowles; Renata Kabiljo; Ahmad Al Khleifat; Ashley Jones; John P. Quinn; Richard J. B. Dobson; Chad M. Swanson; Ammar Al-Chalabi; Alfredo Iacoangeli (Frontiers Bioinform., 2022)

Syn-CpG-Spacer: A Panel web app for synonymous recoding of viral genomes with CpG dinucleotides. - Aleksander Sulkowski; Clément Bouton; Chad M. Swanson (J. Open Source Softw., 2024)