Next-generation sequencing data processing: Analysis of unmapped reads and extremely high mapped peaks. - Jiao Chen; ZuoLei Dai; Chang-Chang Cao; Qianqian Zhang; Hongde Liu; Xiao Sun 006 (BMEI, 2012)

Quantitative group testing-based overlapping pool sequencing to identify rare variant carriers. - Chang-Chang Cao; Cheng Li; Xiao Sun 006 (BMC Bioinform., 2014)

Accurate estimation of haplotype frequency from pooled sequencing data and cost-effective identification of rare haplotype carriers by overlapping pool sequencing. - Chang-Chang Cao; Xiao Sun 006 (Bioinform., 2015)

DectICO: an alignment-free supervised metagenomic classification method based on feature extraction and dynamic selection. - Xiao Ding; Fudong Cheng; Chang-Chang Cao; Xiao Sun 006 (BMC Bioinform., 2015)

Ehapp2: Estimate haplotype frequencies from pooled sequencing data with prior database information. - Chang-Chang Cao; Xiao Sun 006 (J. Bioinform. Comput. Biol., 2016)

Combinatorial pooled sequencing: experiment design and decoding. - Chang-Chang Cao; Xiao Sun 006 (Quant. Biol., 2016)