Autoencoder-based drug-target interaction prediction by preserving the consistency of chemical properties and functions of drugs. - Chang Sun 002; Yangkun Cao; Jin-Mao Wei 001; Jian Liu (Bioinform., 2021)

ALDPI: adaptively learning importance of multi-scale topologies and multi-modality similarities for drug-protein interaction prediction. - Kaimiao Hu; Hui Cui 002; Tiangang Zhang; Chang Sun 002; Ping Xuan (Briefings Bioinform., 2022)

CPMCP: a database of Chinese patent medicine and compound prescription. - Chang Sun 002; Jipeng Huang; Rong Tang 004; Minglei Li; Haili Yuan; Yuxiang Wang; Jinmao Wei 001; Jian Liu (Database J. Biol. Databases Curation, 2022)

Graph Convolutional Autoencoder and Generative Adversarial Network-Based Method for Predicting Drug-Target Interactions. - Chang Sun 002; Ping Xuan; Tiangang Zhang; Yilin Ye (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Drug-Protein interaction prediction by correcting the effect of incomplete information in heterogeneous information. - Yanfei Li; Chang Sun 002; Jin-Mao Wei 001; Jian Liu (Bioinform., 2022)

A Deep Neural Network-Based Co-Coding Method to Predict Drug-Protein Interactions by Analyzing the Feature Consistency Between Drugs and Proteins. - Chang Sun 002; Rong Tang 004; Jipeng Huang; Jin-Mao Wei 001; Jian Liu (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Predicting Drug-Protein Interactions by Self-Adaptively Adjusting the Topological Structure of the Heterogeneous Network. - Rong Tang 004; Chang Sun 002; Jipeng Huang; Minglei Li; Jinmao Wei 001; Jian Liu (IEEE J. Biomed. Health Informatics, 2023)

X-LDA: An interpretable and knowledge-informed heterogeneous graph learning framework for LncRNA-disease association prediction. - Yangkun Cao; Jun Xiao; Nan Sheng; Yinwei Qu; Zhihang Wang; Chang Sun 002; Xuechen Mu; Zhenyu Huang; Xuan Li (Comput. Biol. Medicine, 2023)

Multi-scale Graph Regularized Deep Learning for Accurate Drug-Protein Interaction Prediction. - Yanfei Li; Chenchen Wang; Chang Sun 002; Jinmao Wei (ICIC (26), 2025)

DCGCN: Dual-Channel Graph Convolutional Network-Based Drug-Target Interaction Prediction Method with 3D Molecular Structure. - Chang Sun 002; Yuxin Shen; Min Xu; Wang Qiao; Tianze Shang; Qikai Yin; Yuxiang Wang; Baoju Zhang (J. Chem. Inf. Model., 2025)