Identification of Cancer Development Related Pathways Based on Co-Expression Analyses. - Hongyang Jiang 002; Zhihang Wang; Chaoyi Yin; Peishuo Sun; Ying Xu 001; Huiyan Sun (BIBM, 2020)

Gene regulatory network inference based on causal discovery integrating with graph neural network. - Ke Feng; Hongyang Jiang 002; Chaoyi Yin; Huiyan Sun (Quant. Biol., 2023)

Identifying cancer prognosis genes through causal learning. - Siwei Wu; Chaoyi Yin; Yuezhu Wang; Huiyan Sun (Briefings Bioinform., 2024)

SLIVER: Unveiling large scale gene regulatory networks of single-cell transcriptomic data through causal structure learning and modules aggregation. - Hongyang Jiang 002; Yuezhu Wang; Chaoyi Yin; Hao Pan; Liqun Chen; Ke Feng; Yi Chang 001; Huiyan Sun (Comput. Biol. Medicine, 2024)

Cancer gene identification through integrating causal prompting large language model with omics data-driven causal inference. - Haolong Zeng; Chaoyi Yin; Chunyang Chai; Yuezhu Wang; Qi Dai; Huiyan Sun (Briefings Bioinform., 2025)